Job Description P77581 Confidence 99.97% Date Thu Jan 5 12:30:46 GMT 2012 Rank 67 Aligned Residues 342 % Identity 14% Template d1c7ga_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.																						.	.																																						.
Template Conservation														.	.	.	.	.	.	.																						.	.																																						.
Template Sequence		K	D	I	Y	I	D	L	L	T	D	S	G	.	.	.	.	.	.	.	T	N	A	M	S	D	K	Q	W	A	G	M	M	I	G	D	E	A	Y	A	G	.	.	S	E	N	F	Y	H	L	E	K	T	V	K	E	L	F	G	F	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	.
Template Known Secondary structure		G	G		S				S		S	S	S	.	.	.	.	.	.	.												T	T	S					S	S	S	.	.																		S						S	S													.
Template Predicted Secondary structure														.	.	.	.	.	.	.																						.	.																																						.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																					.	.													.	.	.	.
Query SS confidence																																																					.	.													.	.	.	.
Query Sequence		K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	.	.	A	Y	N	D	I	N	S	A	S	A	L	I	.	.	.	.	D	D	S	T	C	A	V	I	V	E	P
Query Conservation																																																					.	.													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																												.	.													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	K	P	G	Q	Y	V	A	G	N	M	Y	F	T	T	T	R	F	H	Q	E	K	N	G	A	T	F	V	D	I	V	R	D	E	A	H	D	A	S	L	N	L	P	F	K	G	D	I	D	L	N	K	L	A	T	L	I	K	E	K	G	A	E	N	I	A	Y	I	C	L	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.			T	T						S	S												T	T							B		G	G	G	G		T	T				S		T	T		B														G	G	G								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.													.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	H	E	M	A	S	T	Y	G	I	K	I	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	A	G	Y	E	N	V	S	I	K	D	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N
Template Known Secondary structure		S	B	T	T	T	T	S	B																		T								T	T												S	T	T		T	T	S											T	T		S						T	T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.
Query Sequence		V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	.	.	.	.	.	.	.	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V
Query Conservation																													.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.																																					.	.
Template Conservation																																																																								.	.
Template Sequence		I	G	G	F	L	C	M	N	D	E	E	M	F	S	A	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	R	E	A	.	.	G	V	P	I	V	E	P	T
Template Known Secondary structure		S							S																T			T	T	T	T	T																	T																						T	.	.	T			B		S	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.						350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.																		.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	.	.	.	.	.	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	G	G	N	V	V	R	F	A	.	P	A	L	N	V	S	E	E	E	V	T	T	G
Query Conservation																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		G	G	H	A	V	F	L	D	A	R	R	F	C	P	H	L	T	Q	D	Q	F	P	A	Q	S	L	A	A	S	I	Y	M	E	T	G	V	R	S	M	E	R	G	I	V	S	A	G	R	S	K	E	T	G	E	N	H	R	P	K	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D	V	V
Template Known Secondary structure			S	S											T	T	S		G	G	G															S							S						B		S	S	S			B				S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	F	A	A	A	C	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	G	I	I	K	L	Y	Q	H
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions