Job Description P77581 Confidence 99.93% Date Thu Jan 5 12:30:46 GMT 2012 Rank 163 Aligned Residues 290 % Identity 19% Template c3qi6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine gamma-synthase metb (cgs); PDBTitle: crystal structure of cystathionine gamma-synthase metb (cgs) from2 mycobacterium ulcerans agy99 Resolution 1.91 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.
Template Sequence		G	Y	E	Y	A	R	T	G	N	P	T	R	T	A	L	E	A	A	L	A	A	V	E	D	A	A	F	G	R	A	F	S	S	G	M	A	A	A	D	C	A	L	R	A	M	.	.	.	.	.	.	.	.	L	R	P	G	D	H	V	V	I	P	D	D	A	Y	G	G	T	F	R	L	I	D	K	V	F	T	G
Template Known Secondary structure		T	B		B	T	T	T																T	T		S						S	S													.	.	.	.	.	.	.	.			T	T							T	T												T	G	G	G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.									.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.																																						.	.	.	.																						.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																																						.	.	.	.																						.	.	.	.
Template Sequence		W	N	V	E	.	.	.	.	.	.	.	.	.	Y	T	P	V	A	L	A	D	L	D	A	V	R	A	A	I	R	P	T	T	R	L	I	W	V	E	T	P	T	N	P	L	L	S	I	A	D	.	.	.	.	I	A	G	I	A	Q	L	G	A	D	S	S	A	K	V	L	V	D	N	T	F	.	.	.	.	A
Template Known Secondary structure		G	T			.	.	.	.	.	.	.	.	.						T	T											T	T								S	S		T	T	T						.	.	.	.											T	T								T	T	.	.	.	.	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																						.	.	.	.																						.	.	.	.
Template SS confidence
		125	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	.	.	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K
Query Conservation																														.	.
Alig confidence																														.	.																																								.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		S	P	A	L	Q	Q	P	L	S	L	G	A	D	V	V	L	H	S	T	T	Y	I	G	G	H	S	D	V	V	G	G	A	L	V	T	N	D	E	E	L	D	Q	S	F	A	F	L	Q	N	G	A	G	A	V	P	G	P	F	D	A	Y	L	T	M	R	G	L	K	T	.	.	.	.	.	.	L	V	L	R	M
Template Known Secondary structure			T	T	T			G	G	G	G	T		S										S		S	S										S																																T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.																			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Query Sequence		Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L	I	A	G	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																								.	.
Template Conservation																																																								.
Template Sequence		Q	R	H	S	E	N	A	A	A	V	A	E	F	L	A	E	H	P	A	I	S	T	V	L	Y	P	G	L	P	S	H	P	G	H	A	V	A	A	R	Q	M	R	G	F	G	G	M	V	S	V	R	M	R	A	.	G	R	T	A	A	E	Q	L	C	A	K	T	N	I	F	I	L	A	E	S	L	G	S	V	E
Template Known Secondary structure																	T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T	.													S	S	S				S					S	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
																			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		S	L	I	E	H	P	S	A	M	T	G	S	Q	L	E	V	P	D	D	L	V	R	L	S	V	G	I	.	.	.	.	E	D	V	A	D	L	L	D	D	L	K	Q	A	L
Template Known Secondary structure							T	T	T					S					T	T								S	.	.	.	.	S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.					.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions