Job Description P77581 Confidence 99.95% Date Thu Jan 5 12:30:46 GMT 2012 Rank 120 Aligned Residues 301 % Identity 13% Template c3pplB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate transaminase (ncgl0237, cgl0240)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.25 a3 resolution Resolution 1.25 Å

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		85	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure													.	.																															.	.	.	.	.	.
Query SS confidence													.	.																															.	.	.	.	.	.
Query Sequence		R	L	A	K	K	L	I	D	A	T	F	.	.	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	.	.	.	.	.	.	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q
Query Conservation													.	.																															.	.	.	.	.	.
Alig confidence													.	.																															.	.	.	.	.	.																															.
Template Conservation																																																																																	.
Template Sequence		D	I	R	Q	I	W	A	D	L	L	G	V	P	V	E	Q	V	L	A	G	D	A	S	S	L	N	I	X	F	D	V	I	S	W	S	Y	I	F	G	N	N	D	S	V	Q	P	W	S	K	E	E	T	V	K	W	I	C	P	V	P	G	Y	D	R	H	F	S	I	T	E	R	F	G	F	E	X	I	S	V	.
Template Known Secondary structure												T	S		G	G	G					S	S																			T	T		S	S		G	G	G	S	S									S												T	T							.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																															.	.																											.
Query SS confidence																															.	.																											.
Query Sequence		D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	T	C	.	.	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	.	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G
Query Conservation																															.	.																											.
Alig confidence		.	.	.	.	.	.	.	.																						.	.													.														.
Template Conservation		.	.	.	.	.	.	.	.																																				.
Template Sequence		.	.	.	.	.	.	.	.	P	X	N	E	D	G	P	D	X	D	A	V	E	E	L	V	K	N	P	Q	V	K	G	X	W	V	V	P	V	F	S	N	P	T	G	.	F	T	V	T	E	D	V	A	K	R	L	S	A	X	E	T	A	A	P	D	F	R	V	V	W	D	N	A	Y	A	V	H	T	L	T	D
Template Known Secondary structure		.	.	.	.	.	.	.	.				T	T											T	T	S	T	T									S	S		T	T	T		.																	S	S	T	T								T	T	T	T		B	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																				.
Template SS confidence
										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		234	.	.	.	.											.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.
Query Sequence		E	L	Y	A	Y	.	.	.	.	.	.	.	.	.	.	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	.	.	.	.	.
Query Conservation							.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.
Template Conservation
Template Sequence		E	F	P	E	V	I	D	I	V	G	L	G	E	A	A	G	N	P	N	R	F	W	A	F	T	S	T	S	K	I	T	L	A	G	A	G	V	S	F	F	L	T	S	A	E	N	R	K	W	Y	T	G	H	A	G	I	R	G	I	G	P	N	K	V	N	Q	L	A	H	A	R	Y	F	G	D	A	E	G	V	R
Template Known Secondary structure																T	T		T	T								S	T	T	T	S		T	T	T	S																							S																S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L	I	A	G	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.
Template Sequence		A	V	X	R	K	H	A	A	S	L	A	P	K	F	N	K	V	L	E	I	L	D	S	R	L	A	E	Y	G	V	A	Q	W	T	V	P	A	G	G	Y	F	I	S	L	D	V	V	P	G	T	.	.	A	S	R	V	A	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	Y	P	L	R	Q	D	P
Template Known Secondary structure																											G	G	G	T								S	B	S	S							S	T	T		.	.											T	T						T	T	T	T	S	G	G	G			T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E
Query Conservation		.
Alig confidence		.										.
Template Conservation												.
Template Sequence		E	N	K	N	L	R	L	A	P	S	.	L	P	P	V	E	E	L	E	V	A	X	D	G	V	A	T	C	V	L
Template Known Secondary structure		T	S								S	.	S	S
Template Predicted Secondary structure												.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions