Job Description P77581 Confidence 99.97% Date Thu Jan 5 12:30:46 GMT 2012 Rank 74 Aligned Residues 349 % Identity 15% Template c3nraA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate aminotransferase (yp_354942.1) from2 rhodobacter sphaeroides 2.4.1 at 2.15 a resolution Resolution 2.15 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.																									.	.	.	.	.
Query SS confidence																																							.	.	.																									.	.	.	.	.
Query Sequence		D	Q	Q	G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	.	.	.	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	.	.	.	.	.	A	D	R	V	F	F	C	N	S	G	A
Query Conservation																																							.	.	.																									.	.	.	.	.
Alig confidence															.	.																							.	.	.																									.	.	.	.	.
Template Conservation															.	.
Template Sequence		A	P	I	E	G	R	P	V	D	F	S	H	G	.	.	D	V	D	A	H	E	P	T	P	G	A	F	D	L	F	S	A	G	V	Q	S	G	G	V	Q	A	Y	T	E	Y	R	G	D	L	G	I	R	D	L	L	A	P	R	L	A	A	F	T	G	A	P	V	D	A	R	D	G	L	I	I	T	P	G	T	Q
Template Known Secondary structure						S					T	T	S		.	.		T	T	T	S				T	T												T					S			T	T																		T	S				T	T	T	S					S
Template Predicted Secondary structure															.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	T	C	A
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.																																										.
Template Conservation											.	.	.	.	.	.	.	.	.																																										.
Template Sequence		G	A	L	F	L	A	V	A	A	.	.	.	.	.	.	.	.	.	T	V	A	R	G	D	K	V	A	I	V	Q	P	D	Y	F	A	N	R	K	L	V	E	F	F	E	G	E	X	V	P	V	Q	L	D	Y	V	S	A	D	E	.	T	R	A	G	L	D	L	T	G	L	E	E	A	F	K	A	G	A	R	V
Template Known Secondary structure										T	.	.	.	.	.	.	.	.	.	T			T	T								S			T									T	T								B				S	S			.	S	S			B											T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		112	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260
Predicted Secondary structure																																																				.	.	.	.	.																				.
Query SS confidence																																																				.	.	.	.	.																				.
Query Sequence		V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	.	.	.	.	.	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	.	G	G	F	P	V
Query Conservation																																																				.	.	.	.	.																				.
Alig confidence													.																																							.	.	.	.	.																				.
Template Conservation													.
Template Sequence		F	L	F	S	N	P	N	N	P	A	G	.	V	V	Y	S	A	E	E	I	G	Q	I	A	A	L	A	A	R	Y	G	A	T	V	I	A	D	Q	L	Y	S	R	L	R	Y	A	G	A	S	Y	T	H	L	R	A	E	A	A	V	D	A	E	N	V	V	T	I	X	G	P	S	T	E	S	L	S	G	Y	R	L
Template Known Secondary structure						S	S		T	T	T		.																			T								T	T	T	T	S	B		T	T						G	G	G		T	T	S		G	G	G													G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G
Query Conservation
Alig confidence																																									.	.
Template Conservation																																									.	.
Template Sequence		G	V	A	F	G	S	R	A	I	I	A	R	X	E	K	L	Q	A	I	V	S	L	R	A	A	G	Y	S	Q	A	V	L	R	G	W	F	D	E	A	.	.	P	G	W	X	E	D	R	I	A	R	H	Q	A	I	R	D	E	L	L	H	V	L	R	G	E	G	V	F	A	R	T	P	Q	A	G	S	Y	L	F
Template Known Secondary structure																						T	S	S	S						G	G	G	G	G	T	T				.	.	T	T																										B					S	B	S	S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L	I	A	.	.	.	.	.	.	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H	F
Query Conservation																														.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.								.	.
Template Conservation																																											.	.
Template Sequence		P	R	L	P	K	L	A	V	A	P	A	E	F	V	K	I	L	R	L	Q	A	G	V	V	V	T	P	G	T	E	F	S	P	H	T	A	D	S	V	R	L	.	.	N	F	S	Q	D	H	E	A	A	V	A	A	A	R	R	I	V	T	L	V	E	R	Y
Template Known Secondary structure			B				B	S	S																				G	G	G	T		T	T		T	T	B				.	.				S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions