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Job DescriptionP77581
Confidence99.97%DateThu Jan 5 12:30:46 GMT 2012
Rank61Aligned Residues349
% Identity15%Templatec3l8aB_
PDB info PDB header:lyaseChain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans
Resolution1.54 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90...... ...100.......
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Query Sequence  RLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFA. . . . DRVFFCNSGAE
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Template Sequence  WKTSENNPELLQMWVADMDFLP. . . VPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVP
Template Known Secondary structure  TGGGTT
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   20.........30.........40. ........50.........60.........70.........80.........90......
 
   108.110.........120.........130.........140.........150.........160.........170.........180 ......
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Query Sequence  ANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALI. DDSTCA
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Template Sequence  AISIALQAF. . . . . . . . . SEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRF. . . . EIDFEQLEKDIIDNNVKI
Template Known Secondary structure  .........S
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   97..100..... ....110.........120.........130.........140..... ....150.........160...
 
   187..190.........200.........210.........220.........230....... ..240.........250..... ....
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Query Sequence  VIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYA. . . . . . YMHYGVTPDLLTTAKALG. GGFP
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Template Sequence  YLLCSPHNPGG. RVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTK
Template Known Secondary structure  SSBTTTT.B


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TTGGGT
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   164.....170.... .....180.........190.........200.........210.........220.........230.........240..
 
   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  VGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLI
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Template Sequence  NSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYL
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   340.........350.........360. ....... .370.........380.........390.........
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Query Sequence  GCVLNADYAGQAKQISQEAAKA. GVMVLIA. . . . . . GGNVVRFAPALNVSEEEVTTGLDRFAAACEH
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Template Sequence  VWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARL. . NVATPKNTVQEALSRIISVFGK
Template Known Secondary structure 
GGGT

TTTS

GGGG
GGGTT..

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   323......330.........340.........350.........360..... ....370.........380.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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