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Job DescriptionP77581
Confidence100.00%DateThu Jan 5 12:30:46 GMT 2012
Rank8Aligned Residues397
% Identity25%Templatec3i5tB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase prk07036 from rhodobacter2 sphaeroides kd131
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20. ........30.........40.........50.........60.........70.... ..
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Query Sequence  ITRENFDEWMIPVYAPA. . . . . . . PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHT. GN
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Template Sequence  AVGAAMRDHILLPAQEMAKLGKSAQPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPW
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TT

GGGTTT




BTTT

TTT
TT
B






TT
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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   77..80.........90.... .....100.........110.........120.........130.........140.........150....
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Query Sequence  GYTNEPVLRLAKKLIDAT. . FADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAY
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Template Sequence  YMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGN
Template Known Secondary structure  T


TTSSTT

SSTT
TT

TT



SST


GGG
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   155....160.........170.. .......180.........190.........200.........210....
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Query Sequence  SQDFAPLPADIRHAAYND. . . . . . . . . . . . . . . . . . . . INSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCN
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Template Sequence  WPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICE
Template Known Secondary structure 
TTS



TT



GGG
TTS

GGG
SSBTTTTSB


TT
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   215....220.........230.........240 .........250........ .260.........270..... ....280.....
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Query Sequence  RHNALLIFDEVQTGVGRTGELYAYMH. YGVTPDLLTTAKALGGGF. PVGALLATEECARVMTV. . . . . . . GTHGTTYGGN
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Template Sequence  KHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQ
Template Known Secondary structure  TT

TTTTTTTTSSS
TT



S
GGGGTTSS


TTSGGG
TT






TTTT
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   250.........260.........270.........280.........290.........300.........310.........320.........
 
   286...290.........300.........310.........320.........330.........340.........350 .........360..
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Query Sequence  PLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQ. . . AKQISQEAAKAG
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Template Sequence  PVACAAALANIELMEREGIVDQAREMADYFAAALASL. RDLPGVAETRSVGLVGCVQCLLGTAEDKAFTLKIDERCFELG
Template Known Secondary structure  TTTT.TTSTTTT



TT
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   330.........340.........350.........360...... ...370.........380.........390.........400........
 
   363......370.........380.........390.........400...
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Query Sequence  VMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSR
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Template Sequence  LIVRPLG. DLCVISPPLIISRAQIDEMVAIMRQAITEVSAA
Template Known Secondary structure 
T.T


TT

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   415....420. ........430.........440.........450....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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