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Job DescriptionP77581
Confidence99.89%DateThu Jan 5 12:30:46 GMT 2012
Rank198Aligned Residues307
% Identity10%Templatec3hl2D_
PDB info PDB header:transferaseChain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90....... ..100.........110.........120.........130.........140.........150.......
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Query Sequence  EPVLRLAKKLIDATFAD. . . RVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQD
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Template Sequence  KITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKR. . . . . PKAKYIIWPRIDQKSCFKSMITAGFEPVVIE
Template Known Secondary structure  T
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   116...120.........130.........140.........150......... 160.........170.........180.........190
 
   158.160.........170.........180 .........190.........200.........210.........220.........230..
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Query Sequence  FAPLPADIRHAAYNDINSASALI. . . . DDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRT.
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Template Sequence  NVLEGDEL. . . . RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR. . . . LEELAVICANYDIPHIVNNAYGVQSSKC
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GGGSS

TTB



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   191....... .200.........210.........220.........230.... .....240.........250.........260..
 
   233......240.........250.........260...... ...270.........280.........290.........300.........
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Query Sequence  . . GELYAYMHYGVTPDLLTTAKALGGGFPVGALLAT. EECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVK
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Template Sequence  MHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERK
Template Known Secondary structure  S


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   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   310.........320....... ..330.........340... ......350.........360........
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Query Sequence  QRHDWFVERLNTINHRYG. LFSEVRGLGLLIGCVL. . . NADYAGQAKQISQEAAKAGVMVLIA. . . . . . . . . . . . . . . . .
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Template Sequence  EMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGF
Template Known Secondary structure  TT

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TT
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   343......350.........360.........370.........380.........390.........400.........410.........420..
 
   369370.........380.........390.........400
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Query Sequence  . . . . . . . GGNVVRFAPALNVSEEEVTTGLDRFAAACEHF
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Template Sequence  MSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAV
Template Known Secondary structure  TTTSS

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TT

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   423......430.........440.........450.........460.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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