Job Description P77581 Confidence 99.85% Date Thu Jan 5 12:30:46 GMT 2012 Rank 212 Aligned Residues 336 % Identity 15% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.											.	.	.	.	.	.	.	.																						.
Query SS confidence																																.											.	.	.	.	.	.	.	.																						.
Query Sequence		K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	.	S	K	F	W	H	T	G	N	G	Y	.	.	.	.	.	.	.	.	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	A	D	R	V	.	F	F	C	N	S	G	A	E	A
Query Conservation																																.											.	.	.	.	.	.	.	.																						.
Alig confidence										.	.	.					.	.														.											.	.	.	.	.	.	.	.																						.
Template Conservation										.	.	.					.	.
Template Sequence		R	D	T	L	E	M	I	A	.	.	.	S	E	N	F	.	.	V	P	R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	E	F	A	N	V	Q	P	H	S	G	A	Q	A
Template Known Secondary structure				S					T	.	.	.	T				.	.										T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S
Template Predicted Secondary structure										.	.	.					.	.
Template SS confidence
		24	.	.	.	.	.	30	.				.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	.	.	D	S	T	C	A
Query Conservation																																																																											.	.
Alig confidence										.	.	.	.	.	.	.	.	.																																										.															.	.
Template Conservation										.	.	.	.	.	.	.	.	.																																										.
Template Sequence		N	A	A	V	L	H	A	L	.	.	.	.	.	.	.	.	.	M	S	P	G	E	R	L	L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	.	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	V	I
Template Known Secondary structure										.	.	.	.	.	.	.	.	.			T	T								G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	.	T		S																S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		99	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L	L	A	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.																						.																	.
Template Conservation														.	.	.	.	.	.	.																						.																	.
Template Sequence		I	A	G	W	S	A	Y	P	R	V	L	D	.	.	.	.	.	.	.	F	A	A	F	R	S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	.	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	.	A	D	V	V	S	T	T	V	H	T	L	G	G	G	R	S	G	L	I	V	G	K
Template Known Secondary structure						S	S			S				.	.	.	.	.	.	.												T								T	T	.	T						T	T	S	S			S	T	T	T	.		S													S
Template Predicted Secondary structure														.	.	.	.	.	.	.																						.																	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																				.																																								.	.	.	.
Query SS confidence																				.																																								.	.	.	.
Query Sequence		E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	.	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	.	.	.	.	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C
Query Conservation																				.																																								.	.	.	.
Alig confidence																				.																																								.	.	.	.
Template Conservation
Template Sequence		Q	Q	Y	A	K	A	I	N	S	A	V	F	P	G	Q	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	V	S	G	G	T	D	V	H	L	V	L
Template Known Secondary structure		G	G	G									T	T	T	T		S	S																	T	S																						S	S						T	T				G	G	G	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.											.	.	.	.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	.	.	.	.	.	.	.	.	.	.	L	I	A	G	G	N	V	V	R	F	A	P	A	.	.	.	.	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		V	D	L	R	D	S	P	L	D	G	Q	A	A	E	D	L	L	H	E	V	G	I	T	V	N	R	N	A	V	P	N	D	P	R	P	P	M	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A	T	A	L	A
Template Known Secondary structure					T	T	S	S													T	T									T	T		S	S		T	T	T		S													T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions