Job Description P77581 Confidence 99.97% Date Thu Jan 5 12:30:46 GMT 2012 Rank 71 Aligned Residues 329 % Identity 16% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		Q	G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	.	.	.	.	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A
Query Conservation																																																													.	.	.	.
Alig confidence													.	.							.														.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation													.	.							.														.	.	.	.	.	.	.	.
Template Sequence		A	G	R	R	I	I	H	X	E	V	G	.	.	Q	P	G	T	G	A	.	P	R	G	A	V	E	A	L	A	K	S	L	E	.	.	.	.	.	.	.	.	G	L	P	A	L	R	Q	R	I	A	R	L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	T	P	G	S	S	G	G	F	L	L	A
Template Known Secondary structure		T	T									S	.	.	S		S	S		S	.														.	.	.	.	.	.	.	.																							G	G	G					S	S
Template Predicted Secondary structure													.	.							.														.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	T	C	A	V	I	V	E	P	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		F	T	A	L	.	.	.	.	.	.	.	.	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	Q	I	L	R	A	L	G	L	V	P	V	D	L	.	.	.	.	.	.	.	.	.	P	T	A	P	E	N	R	L	Q	P	V	P	A	D	F	A	G	L	D	L	A	G	L	X	V	A	S	P
Template Known Secondary structure						.	.	.	.	.	.	.	.			T	T								S												T	T							.	.	.	.	.	.	.	.	.				G	G	G	T	T	S							T	T	S			S						S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																														.																				.
Query SS confidence																																														.																				.
Query Sequence		Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	.	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	.	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A
Query Conservation																																														.																				.
Alig confidence							.																																							.																				.
Template Conservation							.
Template Sequence		A	N	P	T	G	.	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	L	E	L	T	D	E	C	Y	V	I	N	S	F	S	K	Y	F	S	X	T	G	W	R	V	G	W	X	V	V	P	E	D	Q	V
Template Known Secondary structure			T	T	T		.																		T	T								T	T	T	T		B	S	S	S					G	G	G	T		S	S	S						S	S	S	T	T			T	T	S									G	G	G
Template Predicted Secondary structure							.
Template SS confidence
		171	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		R	V	V	E	R	I	A	Q	N	X	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	D	.	.	.	C	D	A	E	L	Q	A	N	L	D	V	Y	K	A	N	R	K	L	X	L	E	R	L	P	K	A	G	F	T	R	I	A	P	P	D	G	A	F	Y	V	Y	A	D	V	S	D	L	T	D	D
Template Known Secondary structure											T	T															T	T	.	.	.																											T				B					B	T	T							T	T	T		S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.								.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.								.	.	.	.	.	.	.
Query SS confidence													.								.	.	.	.	.	.	.
Query Sequence		A	K	Q	I	S	Q	E	A	A	K	A	.	G	V	M	V	L	I	A	.	.	.	.	.	.	.	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H
Query Conservation													.								.	.	.	.	.	.	.
Alig confidence													.								.	.	.	.	.	.	.								.	.
Template Conservation																																			.	.
Template Sequence		S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	T	L	R	F	.	.	S	Y	A	R	A	T	A	D	I	E	E	G	L	D	R	L	E	A	F	X	Q	A
Template Known Secondary structure																				G	G	G	T		T	T	T	G	G	G					.	.				S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.			360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions