Job Description P77581 Confidence 99.95% Date Thu Jan 5 12:30:46 GMT 2012 Rank 117 Aligned Residues 315 % Identity 11% Template c3fkdC_ PDB info PDB header:lyase Chain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis Resolution 2.50 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	.	.	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K
Query Conservation																																																									.	.
Alig confidence									.	.						.	.																		.	.	.	.																			.	.																					.	.	.
Template Conservation									.	.						.	.																		.	.	.	.																																									.	.	.
Template Sequence		I	V	N	F	S	T	T	.	.	V	W	T	D	G	.	.	D	D	H	L	E	K	H	L	V	E	N	L	N	C	I	R	H	.	.	.	.	Y	P	E	P	D	A	G	T	L	R	Q	X	L	A	K	R	N	S	V	D	N	N	A	I	L	V	T	N	G	P	T	A	A	F	Y	Q	I	A	Q	A	.	.	.
Template Known Secondary structure						S			.	.	S					.	.											T	G	G	G	G	G	S	.	.	.	.				T	T												T	T			G	G	G					S													.	.	.
Template Predicted Secondary structure									.	.						.	.																		.	.	.	.																																									.	.	.
Template SS confidence
		17	.	.	20	.	.	.			.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		.	.	.	.	.	.	.	F	R	G	S	R	S	L	I	A	I	P	S	F	A	E	Y	E	D	A	C	R	X	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	V	C	F	Y	P	S	N	E	D	I	G	E	A	D	F	S	N	X	D	F	C	W	L	C	N	P	N	N	P	D	G	.
Template Known Secondary structure		.	.	.	.	.	.	.	T	T	T								S												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S		G	G	G	S			T	T		S						S	S		T	T	T		.
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
									87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	.	.	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G
Query Conservation																																																				.	.
Alig confidence													.	.																																						.	.
Template Conservation													.	.
Template Sequence		R	L	L	Q	R	T	E	I	L	R	L	.	.	L	N	D	H	P	D	T	T	F	V	L	D	Q	S	Y	V	S	F	T	T	E	E	V	I	R	P	A	D	I	K	G	R	K	N	L	V	X	V	Y	S	F	S	H	A	Y	G	I	P	G	L	R	I	G	Y	I	V	A	N	K	D	F	X	K	R	V	A	A
Template Known Secondary structure													.	.					T	T	S							T	T	G	G	G		S	S					G	G	G	G	T	T		S	S							S	T	T	T	S	S		G	G	G																	T
Template Predicted Secondary structure													.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q
Query Conservation
Alig confidence																																																.	.	.	.																		.	.
Template Conservation																																																.	.	.	.																		.	.
Template Sequence		F	S	T	P	W	A	V	N	A	L	A	I	E	A	A	K	F	I	L	I	H	P	A	Q	F	T	L	P	I	R	K	W	Q	R	N	T	V	D	F	I	T	A	L	N	R	L	.	.	.	.	D	G	V	E	V	H	P	S	G	T	T	F	F	L	L	R	L	.	.	K	K	G	T	A	A	E	L	K	K	Y
Template Known Secondary structure		T			T	T		S																																							S	.	.	.	.	T	T							S	S	S							.	.	S	S	S
Template Predicted Secondary structure																																																.	.	.	.																		.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		E	A	A	K	A	G	V	M	V	L	I	A	.	.	.	.	.	.	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H	F
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.											.	.	.
Template Conservation																														.	.	.
Template Sequence		X	L	E	E	Y	N	X	L	I	R	D	A	S	N	F	R	G	L	D	E	S	Y	V	R	I	T	T	Q	.	.	.	R	P	A	Q	N	Q	L	F	I	K	A	L	E	T	F	L	E	K	Y
Template Known Secondary structure					T	T								T	T	S	T	T			T	T								.	.	.
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions