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Job DescriptionP77581
Confidence99.88%DateThu Jan 5 12:30:46 GMT 2012
Rank205Aligned Residues302
% Identity16%Templatec3ecdC_
PDB info PDB header:transferaseChain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100. ........110.........120.........130.....
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Query Sequence  HPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFF. CNSGAEANEAALKLARKFAHDRYGSHKSGIVAFK
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Template Sequence  SRAVLDAQGS. . . VLTNKYAEGYDEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAK. . . . . . . . PGDTVLGMS
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TS...GGGSS
TT


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   44.....50... ......60.........70.........80.........90.........100... ......110..
 
   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  NAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNR
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Template Sequence  LFNALQ. . . . . . . . . . . . . . . . . . . . YGVSRDTMLIDYDQVEALAQQHKPSLIIAGF. SAYPRKLD. . . . FARFRAIADS
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   125....130 .........140.........150.........160. ........ 170.........
 
   216...220.........230.........240.........250.........260.........270.........280.........290.....
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Query Sequence  HNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKV
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Template Sequence  VGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAKKINS. . . . . AVGPLMHVIAGKAVA
Template Known Secondary structure  TT

TTTTTSS

GGGT
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   198.200.........210.........220.........230.........240.........250....... ..260.........270..
 
   296...300.........310.........320.........330.........340.........350.........360.....
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Query Sequence  LELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMV. . . . . . . . . .
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Template Sequence  FGEALTDDFKTYIDRVLANAQ. ALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPE
Template Known Secondary structure  TS.TT
GGGS
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GGGT

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   279280.........290......... 300.........310.........320.........330.........340.........350.......
 
   366...370........ .380.........390.........400
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Query Sequence  LIAGGNVVRFAPA. . . . LNVSEEEVTTGLDRFAAACEHF
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Template Sequence  KPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL
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TTT
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   358.360.........370.........380.........390......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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