Return to main results Retrieve Phyre Job Id

Job DescriptionP77581
Confidence99.96%DateThu Jan 5 12:30:46 GMT 2012
Rank85Aligned Residues345
% Identity17%Templatec3e2yB_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:kynurenine-oxoglutarate transaminase 3; PDBTitle: crystal structure of mouse kynurenine aminotransferase iii in complex2 with glutamine
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50...... ...60.........70.. .......80.........90..... ....100....
Predicted Secondary structure 






......


...









.....



Query SS confidence 

















. . . . . .















. . .






















. . . . .








Query Sequence  KEYIDFAGGIAVNALGHA. . . . . . HPELREALNEQASKFW. . . HTGNGYTNEPVLRLAKKLIDATF. . . . . ADRVFFCNS
Query Conservation     

         

  ...... 
 
  
    
    ...             

  
     .....   
    
Alig confidence 

















......















...






















.....








Template Conservation              
 
  
 
       
               
    
   

 


  
             
  
 
Template Sequence  VEFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVG
Template Known Secondary structure  T
STT
STT

SS



S


TSGGGGS


TT

TS


TTTSS
Template Predicted Secondary structure 







































Template SS confidence 















































































   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   105....110.........120.........130.........140.........150.........160......... 170.........180
Predicted Secondary structure 





























....



Query SS confidence 
































































. . . .










Query Sequence  GAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAA. . . . YNDINSASALI
Query Conservation 

 
   

  
              

      

    
                        ....  
 
 
    
Alig confidence 











.........











































....










Template Conservation     

      
.........   

 


  
 
          
     
                   
   
    
Template Sequence  AYGSLFNSIQGL. . . . . . . . . VDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKF
Template Known Secondary structure  .........

TT
S

TTTT





SS

BGGG


Template Predicted Secondary structure  .........






























Template SS confidence 















































































   135....140...... ...150.........160.........170.........180.........190.........200.....
 
   181........190.........200.........210.........220.........230...... ...240.........250.....
Predicted Secondary structure 
































.....









Query SS confidence 























































. . . . .


















Query Sequence  DDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY. . . . . AYMHYGVTPDLLTTAKALG
Query Conservation        
  
      
        
  
  
    
  

 


    
  
   .....
        

 
 

   
Alig confidence 
















.





































.....


















Template Conservation             
 



.       
  
          

 

 
                           
 

   
Template Sequence  SSKTKAIILNTPHNPLG. KVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFS
Template Known Secondary structure 
TTSS
TTT
.



T

TTTT
B
TT




GGGSTTTGGGSS
Template Predicted Secondary structure 











.
































Template SS confidence 















































































   206...210.........220.. .......230.........240.........250.........260.........270.........280....
 
   256...260.........270.........280.........290......... 300.........310.........320.........
Predicted Secondary structure  .














.....





Query SS confidence  .











































. . . . .





























Query Sequence  . GGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELI. . . . . NTPEMLNGVKQRHDWFVERLNTINHRYGLF
Query Conservation  . 
                       
        
   
     .....                   
  
       
Alig confidence  .











































.....





























Template Conservation    
 
 
                           
      
                           
   
      
Template Sequence  VTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLK
Template Known Secondary structure 
GGG



TTT



TTTTSTTSTTT
Template Predicted Secondary structure 


















Template SS confidence 















































































   285....290.........300.........310.........320.........330.........340.........350.........360....
 
   330.........340... ......350.........360........ .370.........380........
Predicted Secondary structure 





..........







...........







Query SS confidence 













. . . . . . . . . .
























. . . . . . . . . . .



















Query Sequence  SEVRGLGLLIGCVL. . . . . . . . . . NADYAGQAKQISQEAAKAGVMVLIA. . . . . . . . . . . GGNVVRFAPALNVSEEEVTT
Query Conservation    
 
 
    
  ..........       
  
   
 
 

   
 ...........
   


      
 
 
  
Alig confidence 













..........
























...........






..










Template Conservation     
 

 
                            

 
 

 
 

  
            


..
     
 
  
Template Sequence  PIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRF. . CFIKKDSTLDA
Template Known Secondary structure  B
SBSS
TTS



TTT


S
S
GGGGS
TTTTT..



Template Predicted Secondary structure 

































..



Template SS confidence 















































































   365....370.........380.........390.........400.........410.........420.........430. ........440..
 
   389390.....
Predicted Secondary structure 
Query SS confidence 






Query Sequence  GLDRFAA
Query Conservation   
  
  
Alig confidence 






Template Conservation 
  

  
Template Sequence  AEEIFRA
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 






   443......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions