Job Description P77581 Confidence 100.00% Date Thu Jan 5 12:30:46 GMT 2012 Rank 24 Aligned Residues 387 % Identity 28% Template c3bs8A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate 1-semialdehyde aminotransferase2 complexed with pyridoxamine-5'-phosphate from bacillus subtilis Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.											.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	R	E	N	F	D	E	W	M	.	.	.	.	.	.	.	.	.	.	I	P	V	Y	A	P	A	P	F	I	P	V	R	G	E	G	S	R	L	W	D	Q	Q	G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	T
Query Conservation												.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																																																										.	.
Template Conservation																																																																															.	.
Template Sequence		T	A	F	K	E	A	Q	K	L	M	P	G	G	V	N	S	P	V	R	A	F	K	S	V	D	M	D	P	I	F	M	E	R	G	K	G	S	K	I	F	D	I	D	G	N	E	Y	I	D	Y	V	L	S	W	G	P	L	I	L	G	H	T	N	D	R	V	V	E	S	L	K	K	V	A	E	Y	G	.	.	T
Template Known Secondary structure									T	T	S	G	G	G	S	S	S	G	G	G	G		T	T	T	T	S										B	T					T	T							S	S	G	G	G	T	T		T	T		B	S																.	.	S
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	.	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A
Query Conservation																							.
Alig confidence																							.																									.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		S	F	G	A	P	T	E	V	E	N	E	L	A	K	L	V	I	D	R	V	P	S	V	E	I	V	R	M	V	S	S	G	T	E	A	T	M	S	A	L	R	L	A	R	G	Y	.	.	.	.	.	.	T	G	R	N	K	I	L	K	F	E	G	C	Y	H	G	H	G	D	S	L	L	I	K	A	G	S	G	V
Template Known Secondary structure				S	S																S	T	T		S						S																	.	.	.	.	.	.		T									T					S		G	G	G						S	S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		154	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																								.	.	.
Query SS confidence							.	.	.	.	.	.	.																								.	.	.
Query Sequence		Y	S	Q	D	F	.	.	.	.	.	.	.	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	.	.	.	D	S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D
Query Conservation							.	.	.	.	.	.	.																								.	.	.
Alig confidence							.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		A	T	L	G	L	P	D	S	P	G	V	P	E	G	I	A	K	N	T	I	T	V	P	Y	N	D	L	E	S	V	K	L	A	F	Q	Q	F	G	E	D	I	A	G	V	I	V	E	P	V	A	G	N	M	G	V	V	P	P	Q	E	G	F	L	Q	G	L	R	D	I	T	E	Q	Y	G	S	L	L	I	F	D
Template Known Secondary structure		S		B				S	S	T	T			T	T	S	S	T	T						T	T													G	G	G								S	S	B		S	S	S		B				T	T													T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	.	.	.	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N
Query Conservation																																																							.	.	.
Alig confidence								.																																															.	.	.																								.
Template Conservation								.																																																																									.
Template Sequence		E	V	M	T	G	F	.	R	V	D	Y	N	C	A	Q	G	Y	F	G	V	T	P	D	L	T	C	L	G	K	V	I	G	G	G	L	P	V	G	A	Y	G	G	K	A	E	I	M	E	Q	I	A	P	S	G	P	I	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	L	E	T	L	K	Q	L	.
Template Known Secondary structure			T	T	T	T	T	.	T	T	S	T	T						T	T				S						G	G	G	G	T	T	S	S												T	T	B	T	T	T	S	S	B					S	S	T	T														T		.
Template Predicted Secondary structure								.																																																																									.
Template SS confidence
		241	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.												350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	.	.	.	.	.	.	.	.	.	.	.	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L	I	A	G
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																																	.
Template Sequence		T	P	D	S	Y	K	N	F	I	K	K	G	D	R	L	E	E	G	I	S	K	A	A	E	A	H	G	I	P	H	T	F	N	R	A	G	S	M	I	G	F	F	F	T	N	E	P	V	I	N	Y	E	T	A	K	A	S	D	L	K	L	F	A	S	Y	Y	K	G	M	A	N	E	G	V	F	L	P	P	S	.
Template Known Secondary structure																											T	T									T	T						S	S	S	S				S					T	T	S															T	T					S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H	F	V	S	R
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	Q	F	E	G	L	F	L	S	T	A	H	T	D	E	D	I	E	N	T	I	Q	A	A	E	K	V	F	A	E	I	S	R	R
Template Known Secondary structure		.	S	S	S		B				T	T
Template Predicted Secondary structure		.
Template SS confidence
			398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430