Job Description P77581 Confidence 99.97% Date Thu Jan 5 12:30:46 GMT 2012 Rank 66 Aligned Residues 349 % Identity 14% Template c3b46B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae Resolution 2.00 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.																								.	.	.	.
Query SS confidence																																						.	.	.																								.	.	.	.
Query Sequence		D	Q	Q	G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	.	.	.	F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	.	.	.	.	T	F	A	D	R	V	F	F	C	N	S	G	A	E
Query Conservation																																						.	.	.																								.	.	.	.
Alig confidence															.	.						.																.	.	.																								.	.	.	.
Template Conservation															.	.						.
Template Sequence		N	N	Q	G	R	E	L	I	N	L	G	Q	G	.	.	F	F	S	Y	S	.	P	P	Q	F	A	I	K	E	A	Q	K	A	L	D	I	P	M	V	N	Q	Y	S	P	T	R	G	R	P	S	L	I	N	S	L	I	K	L	Y	S	P	I	Y	N	T	E	L	K	A	E	N	V	T	V	T	T	G	A	N	E
Template Known Secondary structure				T	T	S									.	.	S		S	S		.													T	T	S	G	G	G	G	S				T	T																	T	T	S				G	G	G					S
Template Predicted Secondary structure															.	.						.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	.	.	.	.	.	N	D	I	N	S	A	S	A	L	I	D	D
Query Conservation																																																																	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																																														.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		G	I	L	S	C	L	M	G	L	.	.	.	.	.	.	.	.	.	L	N	A	G	D	E	V	I	V	F	E	P	F	F	D	Q	Y	I	P	N	I	E	L	C	G	G	K	V	V	Y	V	P	I	N	P	P	K	E	L	D	Q	R	N	T	R	G	E	E	W	T	I	D	F	E	Q	F	E	K	A	I	T	S
Template Known Secondary structure											.	.	.	.	.	.	.	.	.			T	T								S			T	T								T	T												T	T	T	T	T	S		B		G	G	G	S										T			T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.						.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	.	.	.	.	.	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G
Query Conservation																																																										.	.	.	.	.
Alig confidence																	.																																									.	.	.	.	.
Template Conservation																	.
Template Sequence		K	T	K	A	V	I	I	N	T	P	H	N	P	I	G	.	K	V	F	T	R	E	E	L	T	T	L	G	N	I	C	V	K	H	N	V	V	I	I	S	D	E	V	Y	E	H	L	Y	F	T	D	S	F	T	R	I	A	T	L	S	P	E	I	G	Q	L	T	L	T	V	G	S	A	G	S	F	A	A	T	G
Template Known Secondary structure		T								S	S		T	T	T		.																			T								T	T	T	T		B		S	S					G	G	G	S						T	T											S		T	T
Template Predicted Secondary structure																	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		258	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		F	P	V	G	A	L	L	A	.	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		W	R	I	G	W	V	L	S	L	N	A	E	L	L	S	Y	A	A	K	A	H	T	R	I	C	F	A	S	P	S	P	L	Q	E	A	C	A	N	S	I	N	D	A	L	K	I	G	Y	F	E	K	M	R	Q	E	Y	I	N	K	F	K	I	F	T	S	I	F	D	E	L	G	L	P	Y	T	A	P	E	G	T
Template Known Secondary structure		S								S																T	S	S																				T																								T							S	B	S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.															.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.												.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	I	G	C	V	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L	I	A	.	.	.	.	.	.	.	.	.	.	.	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																																																		.	.
Template Sequence		Y	F	V	L	V	D	F	S	K	V	K	I	P	E	D	Y	P	Y	P	E	E	I	L	N	K	G	K	D	F	R	I	S	H	W	L	I	N	E	L	G	V	V	A	I	P	P	T	E	F	Y	I	K	E	H	E	K	A	A	E	N	L	L	R	F	.	.	A	V	C	K	D	D	A	Y	L	E	N	A	V	E
Template Known Secondary structure		S							T	T	S				T	T					G	G	G	T	S	S																			B		G	G	G	G	S		G	G	G	G	G	G	G	T	T					.	.				S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.	.	430	.	.	.	.	.
		392	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	A	A	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	L	L	K	D
Template Known Secondary structure				G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions