Job Description P77581 Confidence 99.92% Date Thu Jan 5 12:30:46 GMT 2012 Rank 166 Aligned Residues 314 % Identity 12% Template c2x5fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase Resolution 1.80 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	.	.	.	.	.	.	F	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.
Template Sequence		F	P	Y	A	P	P	Q	G	I	E	E	L	R	D	L	W	Q	Q	K	M	L	R	D	N	P	E	L	S	I	D	N	M	S	R	P	I	V	T	N	A	L	T	H	G	L	S	L	V	G	D	L	F	.	.	.	.	.	.	.	.	V	N	Q	D	D	T	I	L	L	P	E	H	N	W	G	N	Y	K	L	V
Template Known Secondary structure		S	S				T	T																		T	T			G	G	G	B							S														.	.	.	.	.	.	.	.			T	T							S	S			T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	.	.	.	.	.	H	N	A	L
Query Conservation																																																																									.	.	.	.	.
Alig confidence																							.	.	.																														.																		.	.	.	.	.
Template Conservation																							.	.	.																														.
Template Sequence		F	N	T	R	N	G	A	N	L	Q	T	Y	P	I	F	D	K	D	G	H	Y	.	.	.	T	T	D	S	L	V	E	A	L	Q	S	Y	N	K	D	K	V	I	M	I	L	N	Y	P	N	N	P	T	G	.	Y	T	P	T	H	K	E	V	T	T	I	V	E	A	I	K	A	L	A	N	K	G	T	K	V	I
Template Known Secondary structure			T	T	T	T										B		T	T	S		B	.	.	.		S												S	S								S	S		T	T	T		.																					T	T
Template Predicted Secondary structure																							.	.	.																														.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.										.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Query Sequence		L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	.	.	.	.	.	.	.	.	.	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L	L	A	T	.	.	.	.	.	.	.	.	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y
Query Conservation																			.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	V	D	D	A	Y	Y	G	L	F	Y	E	D	V	Y	T	Q	S	L	F	T	A	L	T	N	L	H	S	N	A	I	L	P	I	R	L	D	G	A	T	K	E	F	F	A	W	G	F	R	V	G	F	M	T	F	G	T	S	D	Q	T	T	K	E	V	L	E	A	K	V	K	G	L	I	R	S	N	I	S
Template Known Secondary structure							T	T	T	T		B		S	S				S								T	T			T	T													T	T		G	G	G								B																				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	.	.	.	.	.	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																																																		.	.
Template Conservation																																																																											.	.
Template Sequence		S	G	P	L	P	T	Q	S	A	V	K	H	V	L	K	N	N	K	Q	F	D	K	E	I	E	Q	N	I	Q	T	L	K	E	R	Y	E	V	T	K	E	V	V	Y	A	D	Q	Y	H	S	H	W	Q	A	Y	D	F	N	S	G	Y	F	M	A	I	K	V	H	D	V	D	P	E	A	.	.	L	R	K	H	L
Template Known Secondary structure		S													T	T	T																											T		G	G	G	T	T	T								B	S	S							S	S	S					.	.
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380			.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	A	G	V	M	V	L	I	A	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		I	D	K	Y	S	I	G	V	I	A	L	N	A	T	D	I	R	I	A	F	S	C	V	.	E	K	D	D	I	P	H	V	F	D	S	I	A	K	A	I	D	D
Template Known Secondary structure					T								S	S	S						G	G	G	S	.		G	G	G
Template Predicted Secondary structure																									.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions