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Job DescriptionP77581
Confidence99.96%DateThu Jan 5 12:30:46 GMT 2012
Rank100Aligned Residues327
% Identity15%Templatec2ogeC_
PDB info PDB header:transferaseChain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  YIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFA
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Template Sequence  FLDLKAA. . . . . . . . . YEELRAETDAAIARVLDSGRYLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGI. .
Template Known Secondary structure  S

.........TT

SSSTTSSS
TT
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   12...... .20.........30.........40.........50.........60.........70.........80
 
   121........130.........140.........150.........160.........170.........180.........190.........200
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Query Sequence  HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVP
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Template Sequence  . . . . . . GPGDEVIVPSHTYIASWLAVSATGATPVP. . . . . . . . . VEPHEDHPTLDPLLVEKAITPRTRALLPVHLYGHPA
Template Known Secondary structure  ......
TT
SSS
TTT
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B
SSSSSB
GGG

SS

B
GGG


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   81........90.........100......... 110.........120.........130.........140.....
 
   201........210.........220.........230.........240.........250.........260.........270.........280
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Query Sequence  ASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECARVMTVGTHGT
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Template Sequence  D. . . . MDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGNLGCFGDGGAVVTGDPELAERLRMLRNYG
Template Known Secondary structure 
....TT


TT
TT
TTTT
TT








SS

S
TBTT
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   146 ...150.........160.........170.........180.........190.........200.........210.........220.
 
   281........290.........300.........310.........320.........330.........340.........350
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Query Sequence  . . . . . . . . . . TYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQ
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Template Sequence  SRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTERRDE
Template Known Secondary structure 
SBTTB
SS


B



TTTT
TTSB




TT


S

TT
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   223......230.........240.........250.........260.........270.........280.........290.........300..
 
   351........360........ .370.........380.........390.........400
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Query Sequence  AKQISQEAAKAGVMVLIA. . . . . . . . . . . . . . . . . . . . . . . . . . . GGNVVRFAPALNVSEEEVTTGLDRFAAACEHF
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Template Sequence  . . . LRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV
Template Known Secondary structure  ...TTB

B
S
SS
GGGSGGGTTTS

TTS


STT


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   303......310.........320.........330.........340.........350.........360.........370......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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