Job Description P77581 Confidence 99.88% Date Thu Jan 5 12:30:46 GMT 2012 Rank 207 Aligned Residues 318 % Identity 16% Template c2huuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine Resolution 2.10 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	.	.	.	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A
Query Conservation																																									.	.	.
Alig confidence														.	.										.																.	.	.																						.	.	.	.	.	.	.	.
Template Conservation														.	.										.																																								.	.	.	.	.	.	.	.
Template Sequence		P	Q	R	V	L	D	A	M	S	R	P	I	.	.	L	G	H	L	H	P	E	T	L	.	K	I	M	D	D	I	K	E	G	V	R	Y	L	F	Q	T	N	N	I	A	T	F	C	L	S	A	S	G	H	G	G	M	E	A	T	L	C	N	L	.	.	.	.	.	.	.	.	L	E	D	G	D	V	I	L	I
Template Known Secondary structure									T	T	S			.	.			T	T	S					.															T				S						S	S														.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure														.	.										.																																								.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure										.																																											.
Query SS confidence										.																																											.
Query Sequence		F	K	N	A	F	H	G	R	.	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	.	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E
Query Conservation										.																																											.
Alig confidence										.																				.	.	.	.	.	.	.																	.																			.	.	.	.
Template Conservation																														.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		G	H	T	G	H	W	G	D	R	S	A	D	M	A	T	R	Y	G	A	D	V	R	V	V	K	S	K	V	.	.	.	.	.	.	.	G	Q	S	L	S	L	D	E	I	R	D	A	L	L	I	H	K	P	S	V	L	F	L	T	Q	G	D	S	S	T	G	V	L	Q	G	.	.	.	.	L	E	G	V	G	A
Template Known Secondary structure				S	S													T	T										T	.	.	.	.	.	.	.	T																		S						S			T	T	T	T					.	.	.	.		T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		L	C	H	Q	H	N	C	L	L	I	V	D	T	V	A	.	.	.	.	S	L	G	G	A	P	M	F	M	D	R	W	E	I	D	A	M	Y	T	G	S	Q	V	L	G	A	P	P	G	I	T	P	V	S	F	S	H	R	A	V	E	R	Y	K	R	R	N	T	K	V	K	V	Y	Y	W	D	M	S	L	V	G
Template Known Secondary structure						T	T								T	T	.	.	.	.	T	B	T	T	B				T	T	T	T	T		S													S	S																T		S	S			S		G	G	G
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
													281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	.	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation
Template Sequence		D	Y	W	G	C	F	G	R	P	R	I	Y	H	H	T	I	S	S	T	L	L	Y	G	L	R	E	A	I	A	M	A	C	E	E	G	L	P	A	L	I	A	R	H	E	D	C	A	K	R	L	Y	R	G	L	Q	D	A	G	F	E	L	Y	A	D	P	K	D	R	L	S	T	V	T	T	I	K	V	P	Q	G
Template Known Secondary structure				T	T		S	S	S					S																																												T	T			B	S	S		G	G	G	B		T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.					.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure															.								.	.	.	.									.
Query SS confidence															.								.	.	.	.									.
Query Sequence		G	Q	A	K	Q	I	S	Q	E	A	A	K	A	.	G	V	M	V	L	I	A	.	.	.	.	G	G	N	V	V	R	F	A	.	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H	F
Query Conservation															.								.	.	.	.									.
Alig confidence															.								.	.	.	.									.
Template Conservation
Template Sequence		V	D	W	L	K	A	A	Q	Y	A	M	K	T	Y	L	V	E	I	S	G	G	L	G	P	T	A	G	Q	V	F	R	I	G	L	M	G	Q	N	A	T	T	E	R	V	D	R	V	L	Q	V	F	Q	E	A	V	A	A	V
Template Known Secondary structure																				B				G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions