Job Description P77581 Confidence 100.00% Date Thu Jan 5 12:30:46 GMT 2012 Rank 21 Aligned Residues 385 % Identity 29% Template c2e7uA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 Resolution 1.90 Å

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		1	.	.	.	.				.	.	.	.	10	.	.	.	.											.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	Q	P	I	.	.	.	T	R	E	N	F	D	E	W	M	.	.	.	.	.	.	.	.	.	.	I	P	V	Y	A	P	A	P	F	I	P	V	R	G	E	G	S	R	L	W	D	Q	Q	G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q
Query Conservation							.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	E	R	P	I	S	E	A	Y	F	Q	E	A	K	R	H	I	P	G	G	V	S	S	P	V	R	A	F	K	A	V	G	G	T	P	P	F	L	V	R	G	E	G	A	Y	V	W	D	A	D	G	N	R	Y	L	D	Y	V	M	S	W	G	P	L	I	L	G	H	A	H	P	K	V	L	A	R	V	R	E	T
Template Known Secondary structure																		S	G	G	G	S	S	S	G	G	G	G		T	T	T		S										B	T					T	T							S	S	G	G	G	T	T		T	T		B	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		A	S	K	F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	.	F	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V
Query Conservation																													.
Alig confidence										.	.																		.																										.	.	.	.	.	.
Template Conservation										.	.																																												.	.	.	.	.	.
Template Sequence		L	E	R	G	L	T	F	G	.	.	A	P	S	P	L	E	V	A	L	A	K	K	V	K	R	A	Y	P	F	V	D	L	V	R	F	V	N	S	G	T	E	A	T	M	S	A	L	R	L	A	R	G	Y	.	.	.	.	.	.	T	G	R	P	Y	I	V	K	F	R	G	N	Y	H	G	H	A	D	G	L	L
Template Known Secondary structure				T		S			S	.	.	S																	T	T								S	S																.	.	.	.	.	.										T	T							G	G	G	S
Template Predicted Secondary structure										.	.																																												.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		147	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																								.	.	.
Query SS confidence														.	.	.	.	.	.	.																								.	.	.
Query Sequence		S	A	G	G	Q	P	A	Y	S	Q	D	F	.	.	.	.	.	.	.	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	.	.	.	D	S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H
Query Conservation														.	.	.	.	.	.	.																								.	.	.
Alig confidence														.	.	.	.	.	.	.																								.	.	.																															.
Template Conservation																																																																													.
Template Sequence		V	E	A	G	S	G	A	L	T	L	G	V	P	S	S	A	G	V	P	E	E	Y	A	K	L	T	L	V	L	E	Y	N	D	P	E	G	L	R	E	V	L	K	R	R	G	E	E	I	A	A	I	I	F	E	P	V	V	G	N	A	G	V	L	V	P	T	E	D	F	L	K	A	L	H	E	.	A	K	A	Y
Template Known Secondary structure						S	S	S			B				S	S	T	T							T	T						T	T													G	G	G								S	S	B		T	T	S		B													.	G	G	G	G
Template Predicted Secondary structure																																																																													.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	T	.	.	.	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G
Query Conservation																																																															.	.	.
Alig confidence															.																																																.	.	.
Template Conservation															.
Template Sequence		G	V	L	L	I	A	D	E	V	M	T	G	F	.	R	L	A	F	G	G	A	T	E	L	L	G	L	K	P	D	L	V	T	L	G	K	I	L	G	G	G	L	P	A	A	A	Y	A	G	R	R	E	I	M	E	K	V	A	P	L	G	P	V	Y	Q	A	G	T	L	S	G	N	P	L	A	M	A	A	G	L
Template Known Secondary structure		T								T	T	T	T	T	.	T	S	S	T	T							T				S						G	G	G	G	T	T	S	S												T	T	B	T	T	T	S	S	B					T	T		S
Template Predicted Secondary structure															.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		294	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.												.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure										.																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	L	E	L	I	N	T	.	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	.	.	.	.	.	.	.	.	.	.	.	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A
Query Conservation										.																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	L	E	L	L	E	E	N	P	G	Y	Y	A	Y	L	E	D	L	G	A	R	L	E	A	G	L	K	E	V	L	K	E	K	G	L	P	H	T	V	N	R	V	G	S	M	I	T	V	F	F	T	E	G	P	V	V	T	F	Q	D	A	R	R	T	D	T	E	L	F	K	R	F	F	H	G	L	L	D	R
Template Known Secondary structure											T																								T	T									T	T						S	S	S	S				S					T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	M	V	L	I	A	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		G	I	Y	W	P	P	S	N	.	.	F	E	A	A	F	L	S	V	A	H	R	E	E	D	V	E	K	T	L	E	A	L	R	K	A	L
Template Known Secondary structure		T					S	S	S	.	.	S	S						T	T
Template Predicted Secondary structure										.	.
Template SS confidence
		391	.	.	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.