Job Description P77581 Confidence 100.00% Date Thu Jan 5 12:30:46 GMT 2012 Rank 18 Aligned Residues 398 % Identity 27% Template c2cjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:l-lysine-epsilon aminotransferase; PDBTitle: lysine aminotransferase from m. tuberculosis in external2 aldimine form Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.
Predicted Secondary structure																																			.																																							.	.	.	.	.
Query SS confidence																																			.																																							.	.	.	.	.
Query Sequence		Q	P	I	T	R	E	N	F	D	E	W	M	I	P	V	Y	A	P	A	P	F	I	P	V	R	G	E	G	S	R	L	W	D	.	Q	Q	G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	.	.	.	.	.	T	G	N
Query Conservation																																			.																																							.	.	.	.	.
Alig confidence																																			.																																							.	.	.	.	.
Template Conservation
Template Sequence		P	D	R	V	H	E	V	L	G	R	S	M	L	V	D	G	L	D	I	V	L	D	L	T	R	S	G	G	S	Y	L	V	D	A	I	T	G	R	R	Y	L	D	M	F	T	F	V	A	S	S	A	L	G	M	N	P	P	A	L	V	D	D	R	E	F	H	A	E	L	M	Q	A	A	L	N	K	P	S	N	S
Template Known Secondary structure		G	G	G							T	T	S				S		S	S		B		T	T	T		B	B	T				B	T	T	T							S	S					T		S	S		B	S						T													T					T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.																												.	.	.	.	.	.
Query SS confidence																						.	.	.																												.	.	.	.	.	.
Query Sequence		G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	A	.	.	.	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	.	.	.	.	.	.	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S
Query Conservation																						.	.	.																												.	.	.	.	.	.
Alig confidence																						.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	Y	S	V	A	M	A	R	F	V	E	T	F	A	R	V	L	G	D	P	A	L	P	H	L	F	F	V	E	G	G	A	L	A	V	E	N	A	L	K	A	A	F	D	W	K	S	R	H	N	Q	A	H	G	I	D	P	A	L	G	T	Q	V	L	H	L	R	G	A	F	H	G	R	S	G	Y	T	L	S
Template Known Secondary structure		T																				T	T								S	S																							T	T	S		T	T									T	T					S	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	N	T	K	P	T	I	T	A	R	F	P	K	F	D	W	P	R	I	D	A	P	Y	M	R	P	G	L	D	E	P	A	M	A	A	L	E	A	E	A	L	R	Q	A	R	A	A	F	E	T	R	P	H	D	I	A	C	F	V	A	E	P	I	Q	G	E	G	G	D	R	H	F	R	P	E	F	F	A	A
Template Known Secondary structure		T			S						T	T	S															T	T																								S	T	T	T								S			S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	.	G	T	H	G	T	T	Y	G	G	N	P	L
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		M	R	E	L	C	D	E	F	D	A	L	L	I	F	D	E	V	Q	T	G	C	G	L	T	G	T	A	W	A	Y	Q	Q	L	D	V	A	P	D	I	V	A	F	G	K	K	T	Q	V	C	G	V	M	A	G	R	R	V	D	E	V	A	D	N	V	F	A	V	P	S	R	L	N	S	T	W	G	G	N	L	T
Template Known Secondary structure									T	T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S						G	G	G	S	S							G	G	G	G	G	S	T	T		T	T	T	S	T	T	S	S			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	.	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L
Query Conservation																																										.
Alig confidence																																										.																	.	.
Template Conservation																																																											.	.
Template Sequence		D	M	V	R	A	R	R	I	L	E	V	I	E	A	E	G	L	F	E	R	A	V	Q	H	G	K	Y	L	R	A	R	L	D	E	L	A	A	D	F	P	A	V	V	L	D	P	R	G	R	G	L	M	C	A	F	S	L	.	.	P	T	T	A	D	R	D	E	L	I	R	Q	L	W	Q	R	A	V	I	V	L
Template Known Secondary structure																	T																							S	T	T	T	S							T	T							.	.	S	S														T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H	F	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	G	A	D	T	V	R	F	R	P	P	L	T	V	S	T	A	E	I	D	A	A	I	A	A	V	R	S	A	L	P	V	V	T	K
Template Known Secondary structure				T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450