Phyre 2 alignment of P77581 with c1ynuA

Job Description P77581
Confidence 99.97% Date Thu Jan 5 12:30:46 GMT 2012

Rank 69 Aligned Residues 314

% Identity 12% Template c1ynuA_

PDB info PDB header:lyase Chain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate synthase; PDBTitle: crystal structure of apple acc synthase in complex with l-vinylglycine

Resolution 2.25 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	.	.	.	.	.	.	A	D	R	V	F	F	C	N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence	F	Q	D	Y	H	G	L	P	A	F	K	K	A	M	V	D	F	M	A	E	I	R	G	N	K	V	T	F	D	P	N	H	L	V	L	T	A	G	A	T	S	A	N	E	T	F	I	F	C	L	.	.	.	.	.	.	.	.	A	D	P	G	E	A	V	L	I	P	T	P	Y	Y	P	G	F	D	R	D	L	K
Template Known Secondary structure				T	T																	T	T	T	S	S				G	G	G																			.	.	.	.	.	.	.	.			T	T							S	S			T	T					T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
	82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

	147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	.	.	.	.	.	.	S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L
Query Conservation																																					.	.	.	.	.	.
Alig confidence										.	.	.	.	.																							.	.	.	.	.	.																.
Template Conservation										.	.	.	.	.																																												.
Template Sequence	W	R	T	G	V	E	I	V	P	.	.	.	.	.	I	H	C	T	S	S	N	G	F	Q	I	T	E	T	A	L	E	E	A	Y	Q	E	A	E	K	R	N	L	R	V	K	G	V	L	V	T	N	P	S	N	P	L	G	.	T	T	M	T	R	N	E	L	Y	L	L	L	S	F	V	E	D	K	G	I	H	L
Template Known Secondary structure	T	T	T							.	.	.	.	.					G	G	G	T	T																	T	T										S	S		T	T	T		.																			T
Template Predicted Secondary structure										.	.	.	.	.																																												.
Template SS confidence
	154	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

	221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.									.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																				.
Query SS confidence																	.	.	.	.	.	.	.	.																				.
Query Sequence	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	.	.	.	.	.	.	.	.	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	.	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V
Query Conservation																	.	.	.	.	.	.	.	.																				.
Alig confidence																	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence	I	S	D	E	I	Y	S	G	T	A	F	S	S	P	S	F	I	S	V	M	E	V	L	K	D	S	E	V	W	Q	R	V	H	V	V	Y	S	L	S	K	D	L	G	L	P	G	F	R	V	G	A	I	Y	S	N	D	D	M	V	V	A	A	A	T	K	M	S	S	F	G	L	V	S	S	Q	T	Q	H	L	L
Template Known Secondary structure					T	T	G	G	G			S	S	S									T	T				G	G	G	G							S	S	S	S	S			G	G	G								S													T	T	S
Template Predicted Secondary structure
Template SS confidence
	228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

	292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.																			.
Query SS confidence																																																					.	.	.	.																			.
Query Sequence	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	.	.	.	.	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	.	G	V	M	V	L
Query Conservation																																																					.	.	.	.																			.
Alig confidence																																																					.	.	.	.																			.
Template Conservation
Template Sequence	S	A	M	L	S	D	K	K	L	T	K	N	Y	I	A	E	N	H	K	R	L	K	Q	R	Q	K	K	L	V	S	G	L	Q	K	S	G	I	S	C	L	N	G	N	A	G	L	F	C	W	V	D	M	R	H	L	L	R	S	N	T	F	E	A	E	M	E	L	W	K	K	I	V	Y	E	V	H	L	N	I	S
Template Known Secondary structure				T	T																													T	T	T								S	S	S							G	G	G		S	S	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
	314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

	367	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence	I	A	.	.	.	.	.	.	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H	F	V
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.										.
Template Conservation																		.
Template Sequence	P	G	S	S	C	H	C	T	E	P	G	W	F	R	V	C	F	.	A	N	L	P	E	R	T	L	D	L	A	M	Q	R	L	K	A	F	V	G	E	Y	Y
Template Known Secondary structure		T	T	T	T	T		S	S	T	T							.	S	S	S
Template Predicted Secondary structure																		.
Template SS confidence
	394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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