 |
Job Description | P23845 | Confidence | 99.95% | Date | Thu Jan 5 11:39:52 GMT 2012 |
Rank | 40 | Aligned Residues | 104 |
% Identity | 39% | Template | d1zunb2 |
SCOP info | Elongation factor/aminomethyltransferase common domain
| EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
| EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
|
Resolution | 2.70 |
|
 |
  |   |
332 | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | V | Q | S | A | S | V | D | V | V | W | M | A | E | Q | P | L | S | P | G | Q | S | Y | D | I | K | I | A | G | K | K | T | R | A | R | V | D | G | I | R | Y | Q | V | D | I | N | N | L | T | Q | R | E | V | E | N | L | P | L | N | G | I | G | L | V | D | L | T | F | D | E | P | L | V | L | D | R | Y | Q | Q |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |
|   |   |
Template Sequence |   |
Q | V | S | D | A | F | D | A | X | L | V | W | X | A | E | E | P | X | L | P | G | K | K | Y | D | I | K | R | A | T | S | Y | V | P | G | S | I | A | S | I | T | H | R | V | D | V | N | T | L | E | E | G | P | A | S | S | L | Q | L | N | E | I | G | R | V | K | V | S | L | D | A | P | I | A | L | D | G | Y | S | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
| S | S |
| B |
| T | T |
|
|  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
|
|
|
|
|
| S |
| B |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . |
  |
  |   |
412 | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | V | T | G | G | L | I | F | I | D | R | L | S | N | V | T | V | G | A | G | M | V | H |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|
|
|   |
|
|
Template Sequence |   |
N | R | T | T | G | A | F | I | V | I | D | R | L | T | N | G | T | V | A | A | G | X | I | I |
Template Known Secondary structure |   |
| T | T | T | T |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|