 |
Job Description | P23845 | Confidence | 96.56% | Date | Thu Jan 5 11:39:52 GMT 2012 |
Rank | 335 | Aligned Residues | 66 |
% Identity | 15% | Template | d1kk1a2 |
SCOP info | Elongation factor/aminomethyltransferase common domain
| EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
| EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
|
Resolution | 1.80 |
|
 |
  |   |
347 | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | L | S | P | G | Q | S | Y | D | I | K | I | A | G | K | K | T | R | A | R | V | D | G | I | R | Y | Q | V | D | I | N | N | L | T | Q | R | E | V | E | N | L | P | L | N | G | I | G | L | V | D | L | T | F | D | E | P | L | V | L | D | R | Y | Q | Q | N | P | V | T | G | G | L | I | F | I | D | R | L | S | N |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |
|
|
|
|   |   |
|   |
| . |
|
|
|
|
|   |
|   |   | . | . | . |
|
|
Template Sequence |   |
E | P | I | K | R | K | E | V | L | L | L | N | V | G | T | A | R | T | M | G | L | V | T | G | L | G | K | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | I | E | V | K | L | Q | I | P | V | C | A | E | P | G | D | R | . |
V | A | I | S | R | Q | I | G | S | . |
. |
. |
R | W |
Template Known Secondary structure |   |
|
|
|
| T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | S | S |
|
|
|
|
| T | T |
|  | . |  |  |  |  |  |  |  | T | T | . | . | . |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  | . |  |  |  |  |  |  |
|
|
| . | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
345 | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | |
390 | . | . | . | . | . | . | . | . | |
|
|
. | 400 |
  |
  |   |
427 | . | . | 430 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | V | G | A | G | M | V | H | E |
Query Conservation |   |
  |
|
|
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |
|   |   |
Template Sequence |   |
R | L | I | G | Y | G | I | I | K | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
401 | . | . | . | . | . | . | . | . | 410 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|