 |
Job Description | P23845 | Confidence | 99.95% | Date | Thu Jan 5 11:39:52 GMT 2012 |
Rank | 44 | Aligned Residues | 102 |
% Identity | 18% | Template | d1f60a2 |
SCOP info | Elongation factor/aminomethyltransferase common domain
| EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
| EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
|
Resolution | 1.67 |
|
 |
  |   |
334 | . | . | . | . | . | 340 | . | . | . | . | |
. | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | |
|
. | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Q | S | A | S | V | D | V | V | W | M | . |
A | E | Q | P | L | S | P | G | Q | S | Y | D | I | K | I | A | G | K | K | T | R | A | R | V | D | G | I | R | Y | Q | V | D | I | N | N | L | T | . |
. |
Q | R | E | V | E | N | L | P | L | N | G | I | G | L | V | D | L | T | F | D | E | P | L | V | L | D | R | Y | Q |
Query Conservation |   |
  |   |   |
|   |
|   |
|   |   |
| . |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   | . | . |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
C | A | S | F | N | A | T | V | I | V | L | N | H | P | G | Q | I | S | A | G | Y | S | P | V | L | D | C | H | T | A | H | I | A | C | R | F | D | E | L | L | E | K | N | D | R | R | S | G | K | K | L | E | D | H | P | K | F | L | K | S | G | D | A | A | L | V | K | F | V | P | S | K | P | M | C | V | E | A | F | S |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
| S |
| S |
|
| B |
| T | T |
|
|
|  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  | S |
| S |
| B |
| T | T |
|  |  |  |  |  |  |  |  | S | S |
|
|
|
|
|
| T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
335 | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . |
  |
  |   |
411 | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | N | P | V | T | G | G | L | I | F | I | D | R | L | S | N | V | T | V | G | A | G | M | V | H | E | P |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
| . | . |   |
|   |
|
|
|   |
|   |
|   |   |
|
Template Sequence |   |
E | Y | P | P | L | G | R | F | A | V | R | D | . |
. |
M | R | Q | T | V | A | V | G | V | I | K | S | V |
Template Known Secondary structure |   |
T |
| G | G | G | S |  |  |  |  |  |  | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | |
|
. | . | . | 430 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|