Job Description P23845 Confidence 98.31% Date Thu Jan 5 11:39:52 GMT 2012 Rank 276 Aligned Residues 145 % Identity 15% Template c3snhA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of nucleotide-free human dynamin1 Resolution 3.70 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																.	.	.	90	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	L	T	C	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	T	R	Q	I	Y	E	D	Q	L	S	S	L	H	N	D	S	K	R	H	G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	R	E	Q	G	I
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		Q	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	.	.	G	R	D	F	L	P	R	G	S	G	T	R	R	P	L	V	L	Q	L	V	N	A	T	T	E	Y	A	E	F	L	H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	K	G	I
Template Known Secondary structure									T	T												.	.	T	S			S		S	S					S										S	S						T	T	T		S			B																	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		94	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																.										.	.	.	.	.													.	.
Query SS confidence																.										.	.	.	.	.													.	.
Query Sequence		T	I	D	V	A	Y	R	Y	F	S	T	E	K	R	.	K	F	I	I	A	D	T	P	G	.	.	.	.	.	H	E	Q	Y	T	R	N	M	A	T	G	A	.	.	S	T	C	E	L	A	I	L	L	I	D	A	R	K	G	V	L	D	Q	T	R	R	H	S	F	I	S	T	L	L	G	I	K	H	L	V	V
Query Conservation																.										.	.	.	.	.													.	.
Alig confidence																.										.	.	.	.	.													.	.
Template Conservation
Template Sequence		S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	M	T	K	P	D	I	E	F	Q	I	R	D	M	L	M	Q	F	V	T	K	E	N	C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	D	A	L	K	V	A	K	E	V	D	P	Q	G	Q	R	T	I	G
Template Known Secondary structure			S										S	S	S		S																												S	T	T									T	T	S		S	T	T												S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	K	M	D	L	V	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	T	K	L	D	L	M	D	E
Template Known Secondary structure						S	T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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