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Job DescriptionP23845
Confidence98.69%DateThu Jan 5 11:39:52 GMT 2012
Rank228Aligned Residues158
% Identity16%Templatec3regA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho-like small gtpase; PDBTitle: crystal structure of ehrho1 bound to a gtp analog and magnesium
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
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Query Sequence  KSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFST
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Template Sequence  KKALKIVVVGDGAVGKTCLLLAFSK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GEIPTAYVPTVFENFSHVMKYK
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STTSS.................................S


SS



ST
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   18.20.........30.........40.. .......50.........60....
 
   105....110.. .......120.........130.........140...... ...150.........160.........170.........180
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Query Sequence  EKRKFIIA. DTPGHEQYTRNMATGASTCELAILLIDARKGVLD. . . QTRRHSFISTLLGIKHLVVAINKMDLVDYSEETF
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Template Sequence  NEEFILHLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRKDGSD. .
Template Known Secondary structure  T

SGGGTTTGGGG
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STT
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GGG

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   65....70.........80.........90.........100.........110.........120.........130.........140..
 
   181........190.........200.........210.........220
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Query Sequence  TRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESM
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Template Sequence  DVTKQEGDDLCQKLGC. . . VAYIEASSVAKIGLNEVFEKS
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T
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BTTTTBS
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   143......150........ .160.........170.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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