Job Description P23845 Confidence 96.74% Date Thu Jan 5 11:39:52 GMT 2012 Rank 331 Aligned Residues 163 % Identity 15% Template c3q5dA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atlastin-1; PDBTitle: crystal structure of human atlastin-1 (residues 1-447) bound to gdp,2 crystal form 1 Resolution 2.70 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	K	S	L	L	R	F	L	T	C	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	T	R	Q	I	Y	E	D	Q	L	S	S	L	H	N	D	S	K	R	H	G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	A	E	R	E	Q	G	I	T	I	D	V	A	Y	R	Y	F
Query Conservation
Alig confidence																													.	.	.	.	.	.																																	.	.	.	.
Template Conservation																													.	.	.	.	.	.																																	.	.	.	.
Template Sequence		R	D	K	E	V	V	A	V	S	V	A	G	A	F	R	K	G	K	S	F	L	X	D	F	X	L	R	.	.	.	.	.	.	Y	X	Y	N	Q	E	S	V	D	W	V	G	D	Y	N	E	P	L	T	G	F	S	W	R	G	G	S	E	R	E	T	T	.	.	.	.	G	I	Q	I	W	S	E	I	F	L	I
Template Known Secondary structure		T	T	S	B									S	T	T	S	S											.	.	.	.	.	.						S	T	T	T	S	S			T	T	S	B			S	S		S			S	S						.	.	.	.						S	S
Template Predicted Secondary structure																													.	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.
		103	.	.	.	.	.				.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.												.	160	.	.	.
Predicted Secondary structure								.	.	.									.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.									.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	E	K	R	K	.	.	.	F	I	I	A	D	T	P	G	.	.	.	.	.	H	E	Q	Y	T	R	N	M	A	T	G	A	S	T	C	E	L	A	I	L	L	I	D	A	R	K	G	V	L	D	Q	T	R	R	H	S	F	I	S	T	L	L	.	.	.	.	.	.	.	.	.	.	.	G	I	K	H	L
Query Conservation								.	.	.									.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.									.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	P	D	G	K	K	V	A	V	L	L	X	D	T	Q	G	T	F	D	S	Q	S	T	L	R	D	S	A	T	V	F	A	L	S	T	X	I	S	S	I	Q	V	Y	N	L	S	Q	N	V	Q	E	D	D	L	Q	H	L	Q	L	F	T	E	Y	G	R	L	A	X	E	E	T	F	L	K	P	F	Q	S	L
Template Known Secondary structure				S	S	S															S	S																			S							S	S	S																			T	S				S	S		S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	I	N	K	M	D	L	V	D	Y	S	E	E	T	F	T	R	I	R	E	D	Y	L	T	F	A	G	Q	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	L	V	R	D	W	S	F	P	Y	E	F	S	Y	G	A	D	G	G	A	K	F	L	E	K	R	L	K	V	S	G
Template Known Secondary structure											T	T	T	S		S	B														S	S	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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