Job Description P23845 Confidence 99.32% Date Thu Jan 5 11:39:52 GMT 2012 Rank 118 Aligned Residues 145 % Identity 25% Template c3o47A_ PDB info PDB header:hydrolase, hydrolase activator Chain: A: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1, adp- PDBTitle: crystal structure of arfgap1-arf1 fusion protein Resolution 2.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	S	L	L	R	F	L	T	C	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	T	R	Q	I	Y	E	D	Q	L	S	S	L	H	N	D	S	K	R	H	G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	A	E	R	E	Q	G	I	T	I	D	V	A	Y	R	Y	F	S
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	K	E	M	R	I	L	M	V	G	L	D	A	A	G	K	T	T	I	L	Y	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	G	E	I	V	T	T	I	P	T	I	G	F	N	V	E	T	V	E
Template Known Secondary structure					S								S	T	T	S	S								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S									T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																																					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																.	.																								.																			.	.	.	.
Query SS confidence																.	.																								.																			.	.	.	.
Query Sequence		T	E	K	R	K	F	I	I	A	D	T	P	G	H	.	.	E	Q	Y	T	R	N	M	A	T	G	A	S	T	C	E	L	A	I	L	L	I	D	A	.	R	K	G	V	L	D	Q	T	R	R	H	S	F	I	S	T	L	L	.	.	.	.	G	I	K	H	L	V	V	A	I	N	K	M	D	L	V	D	Y	S
Query Conservation																.	.																								.																			.	.	.	.
Alig confidence																.	.							.	.	.	.	.	.	.											.																			.	.	.	.				.
Template Conservation																								.	.	.	.	.	.	.																																					.
Template Sequence		Y	K	N	I	S	F	T	V	W	D	V	G	R	P	L	W	R	H	Y	F	Q	N	.	.	.	.	.	.	.	T	Q	G	L	I	F	V	V	D	S	N	D	R	E	R	V	N	E	A	R	E	E	L	M	R	M	L	A	E	D	E	L	R	D	A	V	.	L	L	V	F	A	N	K	Q	D	L	P	N	A	M
Template Known Secondary structure			T	T												S						T	T	.	.	.	.	.	.	.										T	T		S	S	S													T		G	G	G	T	T			.								T	T	S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.																																					.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		E	E	T	F	T	R	I	R	E	D	Y	L	T	F	A	G	.	Q	L	P	G	N	L	D	I	R	F	V	P	L	S	A	L	E	G	D	N	V	A	S	Q	S	E
Query Conservation																		.
Alig confidence			.	.	.	.	.	.										.
Template Conservation			.	.	.	.	.	.
Template Sequence		N	.	.	.	.	.	.	A	A	E	I	T	D	K	L	G	L	H	S	L	R	H	R	N	W	Y	I	Q	A	T	C	A	T	S	G	D	G	L	Y	E	G	L	D
Template Known Secondary structure			.	.	.	.	.	.									T		T	T			S	S								B	T	T	T	T	B	T
Template Predicted Secondary structure			.	.	.	.	.	.
Template SS confidence
		265							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions