Job Description P23845 Confidence 100.00% Date Thu Jan 5 11:39:52 GMT 2012 Rank 24 Aligned Residues 192 % Identity 17% Template c3e20A_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp-binding PDBTitle: crystal structure of s.pombe erf1/erf3 complex Resolution 3.50 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.
Predicted Secondary structure																																																					.																					.
Query SS confidence																																																					.																					.
Query Sequence		Q	P	M	R	F	P	V	Q	Y	V	N	R	P	N	L	D	F	R	G	Y	A	G	T	L	A	S	G	R	V	E	V	G	Q	R	V	K	V	L	P	S	G	V	E	S	N	V	A	R	I	V	T	.	F	D	G	D	R	E	E	A	F	A	G	E	A	I	T	L	V	L	T	D	.	E	I	D	I	S	R	G
Query Conservation																																																					.																					.
Alig confidence														.	.																																						.																					.
Template Conservation														.	.
Template Sequence		A	P	F	I	M	P	I	A	S	K	Y	K	.	.	D	L	G	T	I	L	E	G	K	I	E	A	G	S	I	K	K	N	S	N	V	L	V	M	P	I	N	Q	T	L	E	V	T	A	I	Y	D	E	A	D	E	E	I	S	S	S	I	C	G	D	Q	V	R	L	R	V	R	G	D	D	S	D	V	Q	T	G
Template Known Secondary structure														.	.	S	S	S									B	S				S	S							T	T	T											T	T	S				S				T	T									S			T	T			T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		467	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																																						.
Query SS confidence																									.																																						.
Query Sequence		D	L	L	L	A	A	D	E	A	L	P	A	V	Q	S	A	S	V	D	V	V	W	M	.	A	E	Q	P	L	S	P	G	Q	S	Y	D	I	K	I	A	G	K	K	T	R	A	R	V	D	G	I	R	Y	Q	V	D	I	N	N	L	T	.	Q	R	E	V	E	N	L	P	L	N	G	I	G	L	V	D	L	T
Query Conservation																									.																																						.
Alig confidence																									.																																						.
Template Conservation
Template Sequence		Y	V	L	T	S	T	K	N	P	V	H	A	T	T	R	F	I	A	Q	I	A	I	L	E	L	P	S	I	L	T	T	G	Y	S	C	V	M	H	I	H	T	A	V	E	E	V	S	F	A	K	L	L	H	K	L	D	K	T	N	R	K	S	K	K	P	P	M	F	A	T	K	G	M	K	I	I	A	E	L	E
Template Known Secondary structure							S	S	S																S		S	S		B		T	T								S	S																T	T					S	S			S		B		T	T
Template Predicted Secondary structure
Template SS confidence
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	E	P	L	V	L	D	R	Y	Q	Q	N	P	V	T	G	G	L	I	F	I	D	R	L	S	N	V	T	V	G	A	G	M	V	H	E	P	V	S
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		T	Q	T	P	V	C	M	E	R	F	E	D	Y	Q	Y	M	G	R	F	T	L	R	D	.	.	Q	G	T	T	V	A	V	G	K	V	V	K	I	L	D
Template Known Secondary structure											T	T	T												.	.	T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.			.	.	650	.	.	.	.	.	.	.	.	.	660	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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