Job Description P23845 Confidence 100.00% Date Thu Jan 5 11:39:52 GMT 2012 Rank 26 Aligned Residues 190 % Identity 18% Template c3e1yG_ PDB info PDB header:translation Chain: G: PDB Molecule:eukaryotic peptide chain release factor gtp-binding subunit PDBTitle: crystal structure of human erf1/erf3 complex Resolution 3.80 Å

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		M	R	F	P	V	Q	Y	V	N	R	P	N	L	D	F	R	G	Y	A	G	T	L	A	S	G	R	V	E	V	G	Q	R	V	K	V	L	P	S	G	V	E	S	N	V	A	R	I	V	T	F	D	G	D	R	E	E	A	F	A	G	E	A	I	T	L	V	L	.	.	T	D	E	I	D	I	S	R	G	D	L
Query Conservation																																																																					.	.
Alig confidence												.	.																																																								.	.
Template Conservation												.	.
Template Sequence		I	R	L	P	I	V	D	K	Y	K	.	.	D	M	G	T	V	V	L	G	K	L	E	S	G	S	I	C	K	G	Q	Q	L	V	M	M	P	N	K	H	N	V	E	V	L	G	I	L	S	D	D	V	E	T	D	T	V	A	P	G	E	N	L	K	I	R	L	K	G	I	E	E	E	E	I	L	P	G	F	I
Template Known Secondary structure			B									.	.	S	S	S									B	S				T	T						T	T	T									B		B	S	S	S		B	S				T	T										S	S		S				T	T
Template Predicted Secondary structure												.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.			450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																							.																																						.	.
Query SS confidence																							.																																						.	.
Query Sequence		L	L	A	A	D	E	A	L	P	A	V	Q	S	A	S	V	D	V	V	W	M	.	A	E	Q	P	L	S	P	G	Q	S	Y	D	I	K	I	A	G	K	K	T	R	A	R	V	D	G	I	R	Y	Q	V	D	I	N	N	L	T	.	.	Q	R	E	V	E	N	L	P	L	N	G	I	G	L	V	D	L	T	F
Query Conservation																							.																																						.	.
Alig confidence																							.																																						.	.
Template Conservation
Template Sequence		L	C	D	P	N	N	L	C	H	S	G	R	T	F	D	A	Q	I	V	I	I	E	H	K	S	I	I	C	P	G	Y	N	A	V	L	H	I	H	T	C	I	E	E	V	E	I	T	A	L	I	C	L	V	D	K	K	S	G	E	K	S	K	T	R	P	R	F	V	K	Q	D	Q	V	C	I	A	R	L	R	T
Template Known Secondary structure					S	S	S																S			S				T	T							S	S	S																S	S	T	T				S	S			S				T	T
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	L	V	L	D	R	Y	Q	Q	N	P	V	T	G	G	L	I	F	I	D	R	L	S	N	V	T	V	G	A	G	M	V	H	E	P	V	S
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		A	G	T	I	C	L	E	T	F	K	D	F	P	Q	M	G	R	F	T	L	R	D	.	.	E	G	K	T	I	A	I	G	K	V	L	K	L	V	P
Template Known Secondary structure										T	T	S	S	G	G	G	T							.	.	S	S	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.			620	.	.	.	.	.	.	.	.	.	630	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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