Job Description P23845 Confidence 99.41% Date Thu Jan 5 11:39:52 GMT 2012 Rank 107 Aligned Residues 161 % Identity 17% Template c2xtnA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of gtp-bound human gimap2, amino acid2 residues 1-234 Resolution 1.90 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	F	L	T	C	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	T	R	Q	I	Y	E	D	Q	L	S	S	L	H	N	D	S	K	R	H	G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	A	E	R	E	Q	G	I	T	I	D	V	A	Y	R	Y	F	S	T	E	K	R
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	Q	A	F	E	S	K	L	G	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R
Template Known Secondary structure								S	S	T	T	S	S										T	S			S						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S									T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																																.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		108	.	110	.	.	.	.	.	.												.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Query Sequence		K	F	I	I	A	D	T	P	G	.	.	.	.	.	.	.	.	.	.	.	H	E	Q	Y	T	R	N	M	A	T	G	A	S	T	C	E	L	A	I	L	L	I	D	A	R	K	G	V	L	D	Q	T	R	R	H	S	F	I	S	T	L	L	G	.	.	.	I	K	H	L	V	V	A	I	N	K	M	D	L	V
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template Conservation
Template Sequence		E	I	V	I	I	D	T	P	D	M	F	S	W	K	D	H	C	E	A	L	Y	K	E	V	Q	R	C	Y	L	L	S	A	P	G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	M	G	H	T	I	V	L	F	T	H	K	E	D	L
Template Known Secondary structure										S	T	T	S	S	S				T	T													T	T			S								T	T																			T	T	G	G	G	G								G	G	G
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		D	Y	S	E	E	T	F	T	R	I	R	E	D	Y	L	T	F	A	G	Q	L	P	G	N	L	D	I	R	F	V	.	.	.	P	L	S	A	L	E	G	D	N	V	A	S	Q	S	E	S	M
Query Conservation																																.	.	.
Alig confidence																											.					.	.	.
Template Conservation																											.
Template Sequence		G	S	L	M	D	Y	M	H	D	S	D	N	K	A	L	S	K	L	V	A	A	C	G	G	R	.	I	C	A	F	N	N	R	A	E	G	S	N	Q	D	D	Q	V	K	E	L	M	D	C	I
Template Known Secondary structure																							T	T	T		.						T	T
Template Predicted Secondary structure																											.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions