Job Description P23845 Confidence 97.16% Date Thu Jan 5 11:39:52 GMT 2012 Rank 326 Aligned Residues 152 % Identity 13% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50														.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	L	A	Q	Q	I	A	N	E	G	G	V	E	A	W	M	I	A	Q	Q	H	K	S	L	L	R	F	L	T	C	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	Q	I	Y	E	D	Q	L	S	S	L	H	N	D	S	K	R	H
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	E	.	.	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G	K	T	T	T	L	A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	T	Y	R	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L
Template Known Secondary structure											T	S			S	T	T	S			.	.		S		S	S	B							S	S	S																T	S												S	S	T	T	T	T					T					T
Template Predicted Secondary structure																					.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																	.	.	.	.													.	.
Query SS confidence																																																	.	.	.	.													.	.
Query Sequence		G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	A	E	R	E	Q	G	I	T	I	D	V	A	Y	R	Y	F	S	T	E	K	R	K	F	I	I	A	D	T	P	G	.	.	.	.	H	E	Q	Y	T	R	N	M	A	T	G	A	.	.	S	T	C	E	L	A	I	L	L	I	D	A	R	K	G
Query Conservation																																																	.	.	.	.													.	.
Alig confidence			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																.	.	.	.													.	.
Template Conservation			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	.	.	.	.	A	P	L	E	V	C	Y	T	K	E	E	F	Q	Q	A	K	.	.	.	.	.	.	.	.	.	.	E	L	F	S	E	Y	D	H	V	F	V	D	T	A	G	R	N	F	K	D	P	Q	Y	I	D	E	L	K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V	L	S	A	T	A	K
Template Known Secondary structure		T	.	.	.	.	.							S	S									.	.	.	.	.	.	.	.	.	.		T	T	T	T	S	S												S	S	G	G	G	T							S				T	T	B								T	T	S
Template Predicted Secondary structure			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.											.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	D	Q	T	R	R	H	S	F	I	S	T	L	L	G	I	K	H	L	V	V	A	I	N	K	M	D	L	V	D
Query Conservation
Alig confidence		.																						.	.
Template Conservation		.																						.	.
Template Sequence		.	Y	E	D	M	K	H	I	V	K	R	F	S	S	V	P	V	N	Q	Y	I	F	.	.	T	K	I	D	E	T	T
Template Known Secondary structure		.					T	T	T	T	T	T	S	S	S	S								.	.			T	T	T		S
Template Predicted Secondary structure		.																						.	.
Template SS confidence
			296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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