Job Description P23845 Confidence 95.04% Date Thu Jan 5 11:39:52 GMT 2012 Rank 351 Aligned Residues 155 % Identity 11% Template c2ph1A_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:nucleotide-binding protein; PDBTitle: crystal structure of nucleotide-binding protein af2382 from2 archaeoglobus fulgidus, northeast structural genomics target gr165 Resolution 2.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																											.	.	.	.	.
Query SS confidence																				.																											.	.	.	.	.
Query Sequence		E	A	W	M	I	A	Q	Q	H	K	S	L	L	R	F	L	T	C	.	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	T	R	Q	I	Y	E	D	Q	L	.	.	.	.	.	S	S	L	H	N	D	S	K	R	H	G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	A	E	R
Query Conservation																				.																											.	.	.	.	.
Alig confidence																				.																											.	.	.	.	.
Template Conservation
Template Sequence		D	E	E	I	K	E	R	L	G	K	I	K	S	R	I	A	V	X	S	G	K	G	G	V	G	K	S	T	V	T	A	L	L	A	V	H	Y	A	R	Q	G	K	K	V	G	I	L	D	A	D	F	L	G	P	S	I	P	I	L	F	G	L	R	N	A	R	I	A	V	S	A	E	G	L	E	P	V	L	T	Q
Template Known Secondary structure										T	T		S								S	S	S		T	T															T	T										S	S								T	T			S							T	T								T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	G	I	T	I	D	V	A	Y	R	Y	F	S	T	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	F	I	I	A	D	T	P	G	H	E	Q	Y	T	R	N	M	A	T	G	A	S	T	C	E	L	A	I	L	L	I	D	A	R	K	G	V
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	G	I	K	V	X	S	X	Q	F	L	L	P	K	E	N	T	P	V	I	W	R	G	P	L	I	A	G	X	I	R	E	F	L	G	R	V	A	W	G	E	L	D	H	L	L	I	D	L	P	P	G	T	G	D	A	P	L	T	V	X	Q	D	A	K	P	T	G	V	V	V	V	S	T	P	Q	E	L	T
Template Known Secondary structure		T	T							G	G	G	G	S	T	T		S	S						S													S	B				S		S								S	S	S	S	S												S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Q	T	R	R	H	S	F	I	S	T	L	L	G	I	K	H	L	V	V	A	I	N	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	I	V	E	K	A	I	N	X	A	E	E	T	N	T	S	V	L	G	L	V	E	N	X	S
Template Known Secondary structure														T	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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