Job Description P23845 Confidence 98.86% Date Thu Jan 5 11:39:52 GMT 2012 Rank 184 Aligned Residues 154 % Identity 18% Template c2h57A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:adp-ribosylation factor-like protein 6; PDBTitle: crystal structure of human adp-ribosylation factor-like 6 Resolution 2.00 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	F	L	T	C	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	T	R	Q	I	Y	E	D	Q	L	S	S	L	H	N	D	S	K	R	H	G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	A	E	R	E	Q	G	I	T	I	D	V	A	Y	R	Y	F	S	T	E	K	R
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	V	L	C	L	G	L	D	N	S	G	K	T	T	I	I	N	K	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	N	A	Q	S	Q	N	I	L	P	T	I	G	F	S	I	E	K	F	K	S	S	S	L
Template Known Secondary structure										T	T	S	S								T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G			S	S					S	S									S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																																			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		K	F	I	I	A	D	T	P	G	H	E	Q	Y	T	R	N	M	A	T	G	A	S	T	C	E	L	A	I	L	L	I	D	A	R	K	G	V	L	D	Q	T	R	R	H	S	F	I	S	T	L	L	G	.	.	.	.	.	.	I	K	H	L	V	V	A	I	N	K	M	D	L	V	D	Y	S	E	E	T	F	T
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.																				.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		S	F	T	V	F	D	M	S	G	Q	G	R	Y	R	N	L	W	E	H	Y	Y	K	E	G	Q	A	I	I	F	V	I	D	S	S	D	R	L	R	M	V	V	A	K	E	E	L	D	T	L	L	N	H	P	D	I	K	H	R	R	I	P	I	L	F	F	A	N	K	M	D	L	R	D	A	V	T	S	.	.	.
Template Known Secondary structure											S	T	T	T	G	G	G	G	G	G	G	G	G	G		S								T	T																		S	T	T	T	T	T	S											T	T	S	T	T					.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	R	E	D	Y	L	T	F	A	G	Q	L	P	G	N	L	D	I	R	F	V	P	L	S	A	L	E	G	D	N	V	A	S	Q	S	E	S	M
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	V	K	V	S	Q	L	L	C	L	E	N	I	K	D	K	P	W	H	I	C	A	S	D	A	I	K	G	E	G	L	Q	E	G	V	D	W	L
Template Known Secondary structure		.	.								T	G	G	G			S	S								B	T	T	T	T	B	T
Template Predicted Secondary structure		.	.
Template SS confidence
				141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions