Job Description P23845 Confidence 97.00% Date Thu Jan 5 11:39:52 GMT 2012 Rank 329 Aligned Residues 122 % Identity 15% Template c2b92A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: crystal-structure of the n-terminal large gtpase domain of human2 guanylate binding protein 1 (hgbp1) in complex with gdp/alf3 Resolution 3.20 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	S	L	L	R	F	L	T	C	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	T	R	Q	I	Y	E	D	Q	L	S	S	L	H	N	D	S	K	R	H	G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	A	E	R	E	Q	G	I	T	I	D	V	A	Y	R	Y	F	S
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Q	P	M	V	V	V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	G	K	K	K	G	F	S	L	G	S	.	.	.	.	.	.	.	.	T	V	Q	S	H	T	K	G	I	W	M	W	C	V	P	H	P	K	K	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	B									B	S	S	S	S									T	T		S	S	S	S					.	.	.	.	.	.	.	.	S	S	S					S									S	S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		104	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.											160	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	K	R	K	F	I	I	A	D	T	P	G	H	.	.	.	.	.	.	E	Q	Y	T	R	N	M	A	T	G	A	S	T	C	E	L	A	I	L	L	I	D	A	R	K	G	V	L	D	Q	T	R	R	H	S	F	I	S	T	L	L	G	.	.	.	.	.	.	.	.	.	.	I	K	H	L	V	V	A	I
Query Conservation																.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.												.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	H	I	L	V	L	L	D	T	E	G	L	G	D	V	E	K	G	D	N	Q	N	D	S	W	I	F	A	L	A	V	L	L	S	S	T	F	V	Y	N	S	I	G	T	I	N	Q	Q	A	M	D	Q	L	Y	Y	V	T	E	L	T	H	R	I	R	S	K	S	V	S	F	F	P	D	F	V	W	T	L
Template Known Secondary structure		.	.	.											B	T		T	T	T																		S								S	S																											S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		168	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	M	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	F	S	L
Template Known Secondary structure			S			S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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