Job Description P23845 Confidence 100.00% Date Thu Jan 5 11:39:52 GMT 2012 Rank 2 Aligned Residues 410 % Identity 29% Template c1g7cA_ PDB info PDB header:translation Chain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp Resolution 2.05 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	S	L	L	R	F	L	T	C	G	S	V	D	D	G	K	S	T	L	I	G	R	L	L	H	D	T	R	Q	I	Y	E	D	Q	L	S	S	L	H	N	D	S	K	R	H	G	T	Q	G	E	K	L	D	L	A	L	L	V	D	G	L	Q	A	E	R	E	Q	G	I	T	I	D	V	A	Y	R	Y	F	S
Query Conservation
Alig confidence																																																				.	.
Template Conservation																																																				.	.
Template Sequence		E	K	S	H	I	N	V	V	V	I	G	H	V	D	S	G	K	S	T	T	T	G	H	L	I	Y	K	C	G	G	I	D	K	R	T	I	E	K	F	E	K	E	A	A	E	L	G	K	G	S	.	.	F	K	Y	A	W	V	L	D	K	L	K	A	E	R	E	R	G	I	T	I	D	I	A	L	W	K	F	E
Template Known Secondary structure														T	T	S														S		S	S											G	G	G	G	S	S	S		.	.																	T				S		S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.								.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.
Query Sequence		T	E	K	R	K	F	I	I	A	D	T	P	G	H	E	Q	Y	T	R	N	M	A	T	G	A	S	T	C	E	L	A	I	L	L	I	D	A	R	K	G	V	L	D	.	.	.	.	.	.	.	Q	T	R	R	H	S	F	I	S	T	L	L	G	I	K	H	L	V	V	A	I	N	K	M	D	L	V	D	Y	S
Query Conservation																																													.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	K	Y	Q	V	T	V	I	D	A	P	G	H	R	D	F	I	K	N	M	I	T	G	T	S	Q	A	D	C	A	I	L	I	I	A	G	G	V	G	E	F	E	A	G	I	S	K	D	G	Q	T	R	E	H	A	L	L	A	F	T	L	G	V	R	Q	L	I	V	A	V	N	K	M	D	S	V	K	W	D
Template Known Secondary structure			S	S												T	T								S	S	S			S									S								T		T	T													T	T											T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.													.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																								.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	T	F	T	R	I	R	E	D	Y	L	T	F	A	G	Q	L	P	G	N	L	.	D	I	R	F	V	P	L	S	A	L	E	G	D	N	V	A	S	Q	S	E	S	M	P	W	Y	.	.	.	.	.	.	.	.	.	.	.	.	S	G	P	T	L	L	E	V	L	E	T	V	E	I	Q	R	V	V	D	A
Query Conservation																								.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	R	F	Q	E	I	V	K	E	T	S	N	F	I	K	K	V	G	Y	N	P	K	T	V	P	F	V	P	I	S	G	W	N	G	D	N	M	I	E	A	T	T	N	A	P	W	Y	K	G	W	E	K	E	T	K	A	G	V	V	K	G	K	T	L	L	E	A	I	D	A	I	E	Q	P	S	R	P	T	D
Template Known Secondary structure																				T			G	G	G								T	T	T		B	T	T	T	B			S	S		T	T									S	S						S	S							T	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		Q	P	M	R	F	P	V	Q	Y	V	N	R	P	N	L	D	F	R	G	Y	A	G	T	L	A	S	G	R	V	E	V	G	Q	R	V	K	V	L	P	S	G	V	E	S	N	V	A	R	I	V	T	F	D	G	D	R	E	E	A	F	A	G	E	A	I	T	L	V	L	T	D	.	.	E	I	D	I	S	R	G
Query Conservation																																																																									.	.
Alig confidence																																																																									.	.
Template Conservation
Template Sequence		K	P	L	R	L	P	L	Q	D	V	Y	K	I	G	G	I	G	T	V	P	V	G	R	V	E	T	G	V	I	K	P	G	M	V	V	T	F	A	P	A	G	V	T	T	E	V	K	S	V	E	M	H	H	E	Q	L	E	Q	G	V	P	G	D	N	V	G	F	N	V	K	N	V	S	V	K	E	I	R	R	G
Template Known Secondary structure		S													T	T	T										B	S		B		T	T							T	T	T											T	T				S		B		T	T								S	S			G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		322	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure													.													.																																						.	.
Query SS confidence													.													.																																						.	.
Query Sequence		D	L	L	L	A	A	D	E	A	L	P	.	A	V	Q	S	A	S	V	D	V	V	W	M	.	A	E	Q	P	L	S	P	G	Q	S	Y	D	I	K	I	A	G	K	K	T	R	A	R	V	D	G	I	R	Y	Q	V	D	I	N	N	L	T	.	.	Q	R	E	V	E	N	L	P	L	N	G	I	G	L	V	D
Query Conservation													.													.																																						.	.
Alig confidence													.													.																																						.	.
Template Conservation
Template Sequence		N	V	C	G	D	A	K	N	D	P	P	K	G	C	A	S	F	N	A	T	V	I	V	L	N	H	P	G	Q	I	S	A	G	Y	S	P	V	L	D	C	H	T	A	H	I	A	C	R	F	D	E	L	L	E	K	N	D	R	R	S	G	K	K	L	E	D	H	P	K	F	L	K	S	G	D	A	A	L	V	K
Template Known Secondary structure							T	T	S	S																S		S			B		T	T								T	T																T	T	T							S		S		B		T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	F	D	E	P	L	V	L	D	R	Y	Q	Q	N	P	V	T	G	G	L	I	F	I	D	R	L	S	N	V	T	V	G	A	G	M	V	H	E	P
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		F	V	P	S	K	P	M	C	V	E	A	F	S	E	Y	P	P	L	G	R	F	A	V	R	D	.	.	M	R	Q	T	V	A	V	G	V	I	K	S	V
Template Known Secondary structure					S	S							T	T	T		G	G	G	S							.	.	T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.	.