Return to main results Retrieve Phyre Job Id

Job DescriptionP76613
Confidence8.85%DateThu Jan 5 12:25:00 GMT 2012
Rank10Aligned Residues21
% Identity33%Templatec1dmlG_
PDB info PDB header:dna binding protein/transferaseChain: G: PDB Molecule:dna polymerase processivity factor; PDBTitle: crystal structure of herpes simplex ul42 bound to the c-2 terminus of hsv pol
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110... ......
Predicted Secondary structure 







.
Query SS confidence 














.





Query Sequence  FNNNHELVSSGEPDV. ICLSKQ
Query Conservation 
 

  

  




.





Alig confidence 














.





Template Conservation 
  
 



   


 
 


 
Template Sequence  LTSFVVLVPQGTPDVQLRLTRP
Template Known Secondary structure 
SS






S

S

Template Predicted Secondary structure 








Template SS confidence 





















   162.......170.........180...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions