 |
Job Description | P0A6C5 | Confidence | 50.57% | Date | Thu Jan 5 11:02:49 GMT 2012 |
Rank | 232 | Aligned Residues | 62 |
% Identity | 13% | Template | d1qpga_ |
SCOP info | Phosphoglycerate kinase
| Phosphoglycerate kinase
| Phosphoglycerate kinase
|
Resolution | 2.40 |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | |
. | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  | . |
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | R | G | K | T | F | V | I | M | L | . |
. |
. |
. |
. |
. |
. |
G | G | E | A | I | E | H | E | N | F | S | S | I | V | N | D | I | G | L | L | H | S | L | G | I | R | . |
L | V | V | V | . |
Y | G | A | R | P | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | D | A | N | L | A | A | H | H | H | E | P | L |
Query Conservation |   |
|   |   |
|   |   |
|
|
|
| . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |   |   |
|   |   | . |
|
|
|
| . |
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |   |
|   |
|   |
|
|   |
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |
|   |
Template Sequence |   |
L | K | D | K | R | V | F | I | R | V | D | F | N | V | P | L | D | G | K | K | I | T | S | N | Q | R | I | V | A | A | L | P | T | I | K | Y | V | L | E | H | H | P | R | Y | V | V | L | A | S | H | L | G | Q | P | N | G | E | R | N | E | K | Y | S | L | A | P | V | A | K | E | L | Q | S | L | L | G | K | D | V | T |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |
|
|
|
|
|
| B | S | S | S | S | B | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |
|
|
| S |
|
|
| S | S |
|
| G | G | G |
| S |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
  |   |
82 | . | . |
Predicted Secondary structure |   |
|
|
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
Y | H | K |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|
|   |
Template Sequence |   |
F | L | N |
Template Known Secondary structure |   |
 |  | S |
Template Predicted Secondary structure |   |
 |
|
|
Template SS confidence |   |
|
|
|
  |   |
93 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|