Job Description P0A6C5 Confidence 100.00% Date Thu Jan 5 11:02:49 GMT 2012 Rank 21 Aligned Residues 220 % Identity 16% Template c3nwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridylate kinase; PDBTitle: structure and allosteric regulation of the uridine monophosphate2 kinase from mycobacterium tuberculosis Resolution 2.54 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		R	G	K	T	F	V	I	M	L	G	G	E	A	I	E	H	E	N	.	.	.	.	.	.	.	F	S	S	I	V	N	D	I	G	L	L	H	S	L	G	I	R	L	V	V	V	Y	G	A	R	P	Q	I	D	A	N	L	A	A	H	H	H	E	P	L	Y	H	K	N	I	R	V	T	D	A	K	T	L	E	L
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		G	Y	S	R	V	L	L	K	L	G	G	E	M	F	G	G	G	Q	V	G	L	D	P	D	V	V	A	Q	V	A	R	Q	I	A	D	V	V	R	G	G	V	Q	I	A	V	V	I	G	G	G	N	F	F	R	G	A	Q	L	Q	Q	.	.	.	.	.	.	.	L	G	M	E	R	T	R	S	D	Y	M	G	M
Template Known Secondary structure		S		S								S	T	T	S	S	T	T	S	S	S																			T	T										T	T	T			S	S					.	.	.	.	.	.	.		T	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	Q	A	A	G	T	L	Q	L	D	I	T	A	R	L	S	M	S	L	N	N	T	P	L	Q	G	A	H	I	N	V	V	S	G	N	F	I	I	A	Q	P	L	G	V	D	D	G	V	D	Y	C	H	S	G	R	I	R	R	I	D	E	D	A	I	H	R	Q	L	D	S	G	A	I	V	L	M	G	P	V
Query Conservation
Alig confidence						.	.	.						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	T	V	.	.	.	M	N	S	L	A	.	.	.	L	Q	D	F	L	E	K	E	G	I	V	T	R	V	Q	T	A	I	T	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	A	E	P	Y	L	P	L	R	A	V	R	H	L	E	K	G	R	V	V	I	F	G	A	G
Template Known Secondary structure						.	.	.						.	.	.								T	T								S	S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S														T	T							S	T
Template Predicted Secondary structure						.	.	.						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.				.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		A	V	S	V	T	G	E	S	F	N	L	T	S	E	E	I	A	T	Q	L	A	I	K	L	K	A	E	K	M	I	G	F	C	S	S	Q	G	V	T	N	D	D	.	G	D	I	V	S	E	L	F	P	N	E	A	Q	A	R	V	E	A	Q	E	E	K	G	D	Y	N	S	G	T	V	R	F	L	R	G	A	V
Query Conservation																																												.
Alig confidence		.	.	.	.	.																																						.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	M	G	L	P	Y	F	S	T	D	T	T	A	A	Q	R	A	L	E	I	G	A	D	V	V	L	M	A	K	A	V	D	G	V	F	A	E	D	P	A	E	L	L	T	A	V	S	H	R	E	V	L	D	R	.	.	.	.	.	.	.	.	.	.	.	G	L	R	V	A	D	A	T	A	F	S
Template Known Secondary structure		.	.	.	.	.	T	S		T	T															T		S							S	S	S	S			S	S							S										T	.	.	.	.	.	.	.	.	.	.	.	T				S
Template Predicted Secondary structure		.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210												.	.	.	.	.	.	.	.	.	220	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	C	R	S	G	V	R	R	C	H	L	I	S	Y	Q	E	D	G	A	L	L	Q	E	L	F	S	R	D	G	I	G	T	Q	I	V	M
Query Conservation
Alig confidence										.														.
Template Conservation										.														.
Template Sequence		L	C	M	D	N	G	M	P	.	I	L	V	F	N	L	L	T	D	G	N	I	A	.	R	A	V	R	G	E	K	I	G	T	L	V	T	T
Template Known Secondary structure						T	T			.						S	S	S	T	T				.				T	T				S
Template Predicted Secondary structure										.														.
Template SS confidence
		227	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions