Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6C5
Confidence100.00%DateThu Jan 5 11:02:49 GMT 2012
Rank9Aligned Residues241
% Identity21%Templatec3l86A_
PDB info PDB header:transferaseChain: A: PDB Molecule:acetylglutamate kinase; PDBTitle: the crystal structure of smu.665 from streptococcus mutans ua159
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  GKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAGTL
Query Conservation   
  





  
    
  
  


 
   
  







  
   
   
       
 


    
       
  
Alig confidence 















.


























































...
Template Conservation   
 



 


 
   .       
  
   
  



 
 
      
                           ... 
Template Sequence  KDIIVIKIGGVASQQL. SGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHA. . . L
Template Known Secondary structure 


TTGGGS
.
TT


TT



TT
B
...
Template Predicted Secondary structure 




.





















...
Template SS confidence 















































































   2.......10....... ..20.........30.........40.........50.........60.........70...... .
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  QLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDAIHRQLDSGAIVLMGPVAVSVTGES
Query Conservation     
   
       
          
    
        

 
  
 
  
    
  

  
 



 

     
  
Alig confidence 
































...











































Template Conservation         
   
   
  
  
           ...          
 
       
   
  
 


         
  
Template Sequence  LDLVGKNLQEKLRQAGVSCQQLKSDIKHVVAAD. . . YLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDM
Template Known Secondary structure  TTTT


SGGGGGT...S
BSB
TT
S
TTS
Template Predicted Secondary structure 










...





























Template SS confidence 















































































   78.80.........90.........100.........110 .........120.........130.........140.........150....
 
   185....190.........200.........210.........220.........230.........240.........250.........260....
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  FNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDDGDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRR
Query Conservation   




  

 

  
 
 


 



 

       
  
               
 
 


  

  
  

  

 
Alig confidence 






























.

















....

























Template Conservation    
 

  
  

  
 
  

  


 

 .     
  

  
   
 ....      


  

 

      

  
Template Sequence  LNINADYLATAVAVALAADKLILMTNVKGVL. ENGAVLEKITSHQVQEKI. . . . DTAVITAGMIPKIESAAKTVAAGVGQ
Template Known Secondary structure 

TT
S
SSSS
.TT

GGGS....TTSS
TTTT
S
Template Predicted Secondary structure 










.







....










Template SS confidence 















































































   155....160.........170.........180..... ....190.........200... ......210.........220.........
 
   265....270.......
Predicted Secondary structure 




Query SS confidence 












Query Sequence  CHLISYQEDGALL
Query Conservation 
 

 
    


Alig confidence 












Template Conservation 
 
  
   
 

Template Sequence  VLIGDNLLTGTLI
Template Known Secondary structure  SSSS
S
Template Predicted Secondary structure 






Template SS confidence 












   230.........240..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions