Job Description P0A6C5 Confidence 99.97% Date Thu Jan 5 11:02:49 GMT 2012 Rank 28 Aligned Residues 229 % Identity 17% Template c3k4yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: crystal structure of isopentenyl phosphate kinase from m. jannaschii2 in complex with ipp Resolution 2.54 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query Sequence		T	F	V	I	M	L	G	G	E	A	I	E	H	E	N	.	.	.	.	.	.	.	.	.	F	S	S	I	V	N	D	I	G	L	L	H	S	.	.	.	.	.	.	L	G	I	R	L	V	V	V	Y	G	A	R	P	Q	I	D	A	N	L	A	A	H	H	H	E	P	L	Y	H	K	N	I	R	V	T	D	A
Query Conservation																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	I	L	K	L	G	G	S	I	L	S	D	K	N	V	P	Y	S	I	K	W	D	N	L	E	R	I	A	M	E	I	K	N	A	L	D	Y	Y	K	N	Q	N	K	E	I	K	L	I	L	V	H	G	G	G	A	F	G	H	P	V	A	K	K	Y	L	K	I	E	D	G	K	K	I	F	I	N	M	E	K
Template Known Secondary structure									T	T	T	S	S		T	T	S	T	T																								T	T																					T	T				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	L	E	L	V	K	Q	A	A	G	T	L	Q	L	D	I	T	A	R	L	S	M	S	L	N	N	T	P	L	Q	G	A	H	I	N	V	V	S	G	N	F	I	I	A	Q	P	L	G	V	D	D	G	V	D	Y	C	H	S	G	R	I	R	R	I	D	E	D	A	I	H	R	Q	L	D	S	G	A	I	V
Query Conservation
Alig confidence											.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	W	E	I	Q	R	A	M	.	.	.	.	.	R	R	F	N	N	I	I	I	D	T	L	Q	S	Y	D	I	P	A	V	S	I	Q	P	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	V	F	G	D	K	L	I	F	D	T	S	A	I	K	E	M	L	K	R	N	L	V	P
Template Known Secondary structure											.	.	.	.	.														T	T								G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S	S														T	T
Template Predicted Secondary structure											.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		172	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		L	M	.	G	P	V	A	V	S	V	T	G	E	S	F	N	L	T	S	E	E	I	A	T	Q	L	A	I	K	L	K	A	E	K	M	I	G	F	C	S	S	Q	G	V	T	N	D	D	G	D	I	V	S	E	L	F	P	N	E	A	Q	A	R	V	E	A	Q	E	E	K	G	D	Y	N	S	G	T	V	R	F
Query Conservation				.
Alig confidence				.																																												.																			.	.	.	.	.	.	.	.
Template Conservation																																																.																			.	.	.	.	.	.	.	.
Template Sequence		V	I	H	G	D	I	V	I	D	D	K	N	G	Y	R	I	I	S	G	D	D	I	V	P	Y	L	A	N	E	L	K	A	D	L	I	L	Y	A	T	D	V	D	G	V	L	I	.	D	N	K	P	I	K	R	I	D	K	N	N	I	Y	K	I	L	N	.	.	.	.	.	.	.	.	Y	L	G	M	K	Y	K
Template Known Secondary structure											T	T	T																			T		S							S	S	S	S	S			.	T	T				S				S	S	T	T						.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.																			.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.	.	.	210	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	G	A	V	K	A	C	R	S	G	V	R	R	C	H	L	I	S	Y	Q	E	D	G	A	L	L	Q	E	L	F	S	R	D	G	I	G	T	Q	I
Query Conservation
Alig confidence				.	.	.	.																				.
Template Conservation				.	.	.	.																				.
Template Sequence		I	E	.	.	.	.	M	I	R	K	N	K	C	R	G	F	V	F	N	G	N	K	A	N	N	.	I	Y	K	A	L	L	G	E	V	E	G	T	E	I
Template Known Secondary structure				.	.	.	.		T	T	T	T	T								S	S	S	T	T		.						T	T				S
Template Predicted Secondary structure				.	.	.	.																				.
Template SS confidence
		222	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions