Job Description P0A6C5 Confidence 99.72% Date Thu Jan 5 11:02:49 GMT 2012 Rank 61 Aligned Residues 118 % Identity 19% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.									.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		Q	I	R	R	A	T	I	N	D	I	G	G	I	L	E	L	I	R	P	L	E	Q	Q	G	I	L	V	R	R	S	R	E	Q	L	E	M	E	I	.	.	.	.	.	.	.	.	D	K	F	T	I	I	Q	R	D	N	T	T	I	A	C	A	A	L	Y	P	F	P	.	.	.	.	E	E	K	I	G	E	M	A
Query Conservation																																								.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G	L	R	G	F	V	D
Template Known Secondary structure		G						G	G	G															T	T																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	A	V	H	P	D	Y	R	S	S	S	R	G	E	V	L	L	E	R	I	A	A	Q	A	K	Q	S	G	L	S	K	L	F	V	L	T	T	R	S	I	H	W	F	Q	E	R	G	F	T	P	V	D	I
Query Conservation
Alig confidence																																							.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R
Template Known Secondary structure							G	G	G	T	T	S	S																T	T									.	.	.	.						T	T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions