Job Description P0A6C5 Confidence 84.15% Date Thu Jan 5 11:02:49 GMT 2012 Rank 216 Aligned Residues 68 % Identity 12% Template c3ew8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 8; PDBTitle: crystal structure analysis of human hdac8 d101l variant Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure													.																									.	.	.	.	.	.	.
Query SS confidence													.																									.	.	.	.	.	.	.
Query Sequence		T	E	L	V	E	G	F	R	H	S	V	.	P	Y	I	N	T	H	R	G	K	T	F	V	I	M	L	G	G	E	A	I	E	H	E	N	.	.	.	.	.	.	.	F	S	S	I	V	N	D	I	G	L	L	H	S	L	G	I	R	L	V	V	V	Y	G	A	R	P	Q	I	D	A	N	L	A
Query Conservation													.																									.	.	.	.	.	.	.
Alig confidence													.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	Y	Y	Q	I	C	E	S	V	L	K	E	V	Y	Q	A	F	N	P	K	A	V	V	L	Q	L	G	A	D	T	I	A	G	D	P	M	C	S	F	N	M	T	P	V	G	I	G	K	C	L	K	Y	I	L	Q	W	Q	L	A	T	L	I	L	G	G	G	G	Y	N	L	A	N	T	A	R
Template Known Secondary structure																						S								S	T	T	B	T	T		T	T					B														T	T													S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions