Job Description P0A6C5 Confidence 99.97% Date Thu Jan 5 11:02:49 GMT 2012 Rank 30 Aligned Residues 217 % Identity 13% Template c2va1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of ump kinase from ureaplasma parvum Resolution 2.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		R	G	K	T	F	V	I	M	L	G	G	E	A	I	E	H	E	N	.	.	.	.	.	.	.	.	F	S	S	I	V	N	D	I	G	L	L	H	S	L	G	I	R	L	V	V	V	Y	G	A	R	P	Q	I	D	A	N	L	A	A	H	H	H	E	P	L	Y	H	K	N	I	R	V	T	D	A	K	T	L	E
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	Q	R	I	V	I	K	I	S	G	A	C	L	K	Q	N	D	S	S	I	I	D	F	I	K	I	N	D	L	A	E	Q	I	E	K	I	S	K	K	Y	I	V	S	I	V	L	G	G	G	N	I	W	R	G	S	I	A	K	E	L	D	M	.	.	.	.	.	.	.	.	.	.	.	D	R	N	L	A	D
Template Known Secondary structure				S								G	G	G	G		S	S	T	T		S	S																T	T	T	S									T	T	T									T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.												.	.	.	.	.	70
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	K	Q	A	A	G	T	L	Q	L	D	I	T	A	R	L	S	M	S	L	N	N	T	P	L	Q	G	A	H	I	N	V	V	S	G	N	F	I	I	A	Q	P	L	G	V	D	D	G	V	D	Y	C	H	S	G	R	I	R	R	I	D	E	D	A	I	H	R	Q	L	D	S	G	A	I	V	L	M	G	P
Query Conservation
Alig confidence															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	M	G	M	M	A	T	I	I	N	G	L	A	.	.	.	L	E	N	A	L	N	H	L	N	V	N	T	I	V	L	S	A	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	K	L	V	H	E	S	S	A	N	N	I	K	K	A	I	E	K	E	Q	V	M	I	F	V	A
Template Known Secondary structure															.	.	.							T	T	T								S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T															T	T							S
Template Predicted Secondary structure															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		V	A	V	S	V	T	G	E	S	F	N	L	T	S	E	E	I	A	T	Q	L	A	I	K	L	K	A	E	K	M	I	G	F	C	S	.	S	Q	G	V	T	N	D	D	G	D	I	V	S	E	L	F	P	N	E	A	Q	A	R	V	E	A	Q	E	E	K	G	D	Y	N	S	G	T	V	R	F	L	R	G	A
Query Conservation																																					.
Alig confidence							.	.	.	.	.																										.						.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.																																.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	G	F	P	.	.	.	.	.	Y	F	T	T	D	S	C	A	A	I	R	A	A	E	T	E	S	S	I	I	L	M	G	K	N	G	V	D	G	V	Y	.	.	D	S	D	F	Y	E	H	I	T	F	N	M	A	L	T	Q	.	.	.	.	.	.	.	.	.	.	.	N	L	K	V	M	D	A	T	A	L
Template Known Secondary structure		T	T	S	S	S	.	.	.	.	.	S															T		S							S	S			S	B		.	.	S				B	S											.	.	.	.	.	.	.	.	.	.	.	T			S	S
Template Predicted Secondary structure							.	.	.	.	.																																.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.												.	.	.	.	.	.	.	.	190	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	A	C	R	S	G	V	R	R	C	H	L	I	S	Y	Q	E	D	G	A	L	L	Q	E	L	F	S	R	D	G	I	G	T	Q	I	V	M
Query Conservation
Alig confidence											.														.
Template Conservation											.														.
Template Sequence		A	L	C	Q	E	N	N	I	N	.	L	L	V	F	N	I	D	K	P	N	A	I	V	.	D	V	L	E	K	K	N	K	Y	T	I	V	S	K
Template Known Secondary structure							T	T			.						S	S	S	T	T				.				T	T		S
Template Predicted Secondary structure											.														.
Template SS confidence
		200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions