Job Description P0A6C5 Confidence 100.00% Date Thu Jan 5 11:02:49 GMT 2012 Rank 1 Aligned Residues 419 % Identity 42% Template c2r98A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	E	G	F	R	H	S	V	P	Y	I	N	T	H	R	G	K	T	F	V	I	M	L	G	G	E	A	I	E	H	E	N	F	S	S	I	V	N	D	I	G	L	L	H	S	L	G	I	R	L	V	V	V	Y	G	A	R	P	Q	I	D	A	N	L	A	A	H	H	H	E	P	L	Y	H	K	N	I	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	A	H	F	R	E	A	A	P	Y	I	R	Q	X	R	G	T	T	L	V	A	G	I	D	G	R	L	L	E	G	G	T	L	N	K	L	A	A	D	I	G	L	L	S	Q	L	G	I	R	L	V	L	I	H	G	A	Y	H	F	L	D	R	L	A	A	A	Q	G	R	T	P	H	Y	C	R	G	L	R	V
Template Known Secondary structure																	T	T									G	G	G	S	S	S	S															T	T																				S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	A	K	T	L	E	L	V	K	Q	A	A	G	T	L	Q	L	D	I	T	A	R	L	S	M	S	L	N	N	T	P	L	Q	G	A	H	I	N	V	V	S	G	N	F	I	I	A	Q	P	L	G	V	D	D	G	V	D	Y	C	H	S	G	R	I	R	R	I	D	E	D	A	I	H	R	Q	L	D	S	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.
Template Sequence		T	D	E	T	S	L	G	Q	A	Q	Q	F	A	G	T	V	R	S	R	F	E	A	A	L	C	.	.	.	.	.	.	.	.	.	G	S	S	V	P	L	V	S	G	N	F	L	T	A	R	P	I	G	V	I	D	G	T	D	X	E	Y	A	G	V	I	R	K	T	D	T	A	A	L	R	F	Q	L	D	A	G
Template Known Secondary structure		B																									.	.	.	.	.	.	.	.	.																					T	T				B	T	B																	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	L	M	G	P	V	A	V	S	V	T	G	E	S	F	N	L	T	S	E	E	I	A	T	Q	L	A	I	K	L	K	A	E	K	M	I	G	F	C	S	S	Q	G	V	T	N	D	D	G	D	I	V	S	E	L	F	P	N	E	A	Q	A	R	V	E	A	Q	E	E	K	G	D	Y	N	S	G	T	V
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		N	I	V	W	X	P	P	L	G	H	S	Y	G	G	K	T	F	N	L	D	X	V	Q	A	A	A	S	V	A	V	S	L	Q	A	E	K	L	V	Y	L	T	L	S	D	G	I	S	R	P	D	G	T	L	A	E	T	L	S	A	Q	E	A	Q	S	L	A	E	.	.	.	.	.	.	H	A	A	S	E	T	R
Template Known Secondary structure								S					T	T	S																		T	T		S							S	S	S	S		B		T	T	S		B		S												T	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	L	R	G	A	V	K	A	C	R	S	G	V	R	R	C	H	L	I	S	Y	Q	E	D	G	A	L	L	Q	E	L	F	S	R	D	G	I	G	T	Q	I	V	M	E	S	A	E	Q	I	R	R	A	T	I	N	D	I	G	G	I	L	E	L	I	R	P	L	E	Q	Q	G	I	L	V	R	R	S	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	I	S	S	A	V	A	A	L	E	G	G	V	H	R	V	Q	I	L	N	G	A	A	D	G	S	L	L	Q	E	L	F	T	R	N	G	I	G	T	S	I	A	K	E	A	F	V	S	I	R	Q	A	H	S	G	D	I	P	H	I	A	A	L	I	R	P	L	E	E	Q	G	I	L	L	H	R	S	R	E
Template Known Secondary structure													T	T		S							T	T	S	T	T								S	S	S		S	S																G	G	G															T	S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	E	M	E	I	D	K	F	T	I	I	Q	R	D	N	T	T	I	A	C	A	A	L	Y	P	F	P	E	E	K	I	G	E	M	A	C	V	A	V	H	P	D	Y	R	S	S	S	R	G	E	V	L	L	E	R	I	A	A	Q	A	K	Q	S	G	L	S	K	L	F	V	L	T	T	R	S	I	H	W	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	E	N	H	I	S	E	F	S	I	L	E	H	D	G	N	L	Y	G	C	A	A	L	K	T	F	A	E	A	D	C	G	E	I	A	C	L	A	V	S	P	Q	A	Q	D	G	G	Y	G	E	R	L	L	A	H	I	I	D	K	A	R	G	I	G	I	S	R	L	F	A	L	S	T	N	T	G	E	W	F
Template Known Secondary structure						S	G	G	G							T	T												S	S	T	T											G	G	G	T	T	S	S																T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		Q	E	R	G	F	T	P	V	D	I	D	L	L	P	E	S	K	K	Q	L	Y	N	.	Y	Q	R	K	S	K	V	L	M	A	D	L
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		A	E	R	G	F	Q	T	A	S	E	D	E	L	P	E	T	R	R	K	D	Y	R	S	N	G	R	N	S	H	I	L	V	R	R	L
Template Known Secondary structure			T	T	T						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.