Job Description P0A6C5 Confidence 43.25% Date Thu Jan 5 11:02:49 GMT 2012 Rank 236 Aligned Residues 102 % Identity 15% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	E	R	K	T	E	L	V	E	G	F	R	H	S	V	P	Y	I	N	T	H	R	G	K	T	F	V	I	M	L	G	G	E	A	I	E	H	E	N	F	S	S	I	V	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	L	L	H	S	L	G	I	R	L	V	V	V	Y	G	A
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																				.	.	.	.																																																							.	.	.
Template Sequence		I	K	P	S	G	Y	D	V	L	Q	F	L	A	K	A	G	K	L	.	.	.	.	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V	.	.	.	G
Template Known Secondary structure																T	T		T	.	.	.	.	T	S								S	S													T									S	S														T	T						.	.	.
Template Predicted Secondary structure																				.	.	.	.																																																							.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	Q	I	D	A	N	L	A	A	H	H	H	E	P	L	Y	H	K	N	I	R	V	T	D	A	K	T	L	E	L	V	K	Q	A	A	G	T	L	Q	L	D	I	T	A	R
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		A	G	L	I	T	D	L	A	E	E	A	G	M	T	G	I	F	I	Y	S	A	.	A	T	V	R	Q	A	F	S	D	A	L	D	M	T	R	M	S	L	R	H	N	T	H	D
Template Known Secondary structure		S										T	T	S					S	S			.
Template Predicted Secondary structure																							.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions