Job Description P0A6C5 Confidence 99.94% Date Thu Jan 5 11:02:49 GMT 2012 Rank 35 Aligned Residues 200 % Identity 15% Template c2j4kC_ PDB info PDB header:transferase Chain: C: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of uridylate kinase from sulfolobus2 solfataricus in complex with ump to 2.2 angstrom3 resolution Resolution 2.2 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		F	V	I	M	L	G	G	E	A	I	E	H	E	N	.	.	.	F	S	S	I	V	N	D	I	G	L	L	H	S	L	G	I	R	L	V	V	V	Y	G	A	R	P	Q	I	D	A	N	L	A	A	H	H	H	E	P	L	Y	H	K	N	I	R	V	T	D	A	K	T	L	E	L	V	K	Q	A	A	G	T	L
Query Conservation																.	.	.
Alig confidence																.	.	.																																				.	.	.	.	.																				.	.	.	.
Template Conservation																																																						.	.	.	.	.																				.	.	.	.
Template Sequence		I	I	L	K	I	S	G	K	F	F	D	E	D	N	V	D	N	L	I	V	L	R	Q	S	I	K	E	L	A	D	N	G	F	R	V	G	I	V	T	G	G	G	S	T	A	R	R	Y	I	K	L	A	.	.	.	.	.	R	E	I	G	I	G	E	A	Y	L	D	L	L	G	I	W	A	S	R	.	.	.	.
Template Known Secondary structure								G	G	G	G	T	T	T																		T	T																					.	.	.	.	.			T	T																.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.																				.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	I	T	A	R	L	S	M	S	L	N	N	T	P	L	Q	G	A	H	I	N	V	V	S	G	N	F	I	I	A	Q	P	L	G	V	D	D	G	V	D	Y	C	H	S	G	R	I	R	R	I	D	E	D	A	I	H	R	Q	L	D	S	G	A	I	V	L	M	G	P	V	A	V	S	V	T	G	E	S
Query Conservation
Alig confidence		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		.	.	L	N	A	Y	L	V	M	F	S	L	Q	D	L	A	Y	M	H	V	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	E	F	I	Q	D	W	S	H	G	K	V	V	V	T	G	.	.	.	.	.	.	.	G	F	Q
Template Known Secondary structure		.	.									T	T	T	T	T	B		S				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									T	T	S	S	B					.	.	.	.	.	.	.			S
Template Predicted Secondary structure		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
				74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																															.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.								.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L	T	S	E	E	I	A	T	Q	L	A	I	K	L	K	A	E	K	M	I	G	F	C	S	S	Q	G	V	T	N	D	D	G	D	I	V	S	E	L	F	P	N	E	A	Q	A	R	V	E	A	Q	E	E	K	G	D	Y	N	S	G	T	V	R	F	L	R	G	A	V	K	A	C	R	S	G	V	R	R
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		P	G	Q	S	T	A	A	V	A	A	L	V	A	E	A	S	S	S	K	T	L	V	V	A	T	N	V	D	G	V	Y	E	K	D	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	I	P	H	L	T	T	Q	D	L	R	L	L	D	P	L	A	I	K	I	V	E	R	S	K	I	.	R
Template Known Secondary structure		T	T	S													T	T		S							S	S					S	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									T	T		.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	L	I	S	Y	Q	E	D	G	A	L	L	Q	E	L	F	S	R	D	G	I	G	T	Q	I	V	M
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		V	I	V	M	N	Y	R	K	L	N	R	I	I	.	D	I	L	K	G	E	E	V	S	S	I	I	E	P
Template Known Secondary structure							G	G	G	G	G	G			.					T		S	S
Template Predicted Secondary structure															.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions