Return to main results Retrieve Phyre Job Id

Job DescriptionP52073
Confidence100.00%DateThu Jan 5 12:05:09 GMT 2012
Rank20Aligned Residues168
% Identity15%Templated1wvfa2
SCOP infoFAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like FAD-linked oxidases, N-terminal domain
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40 .........50.........60.........70.........80
Predicted Secondary structure 

















....
















Query SS confidence 



































. . . .







































Query Sequence  CDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPV. . . . TGQTLDVRCHRGIVNYDPTELVITARVGTPLVTIEAALES
Query Conservation    
 


   
  
     
    
 

        .... 
 


   

 
  

       
 


    
   
  
Alig confidence 



































....







































Template Conservation 
 
 


   
  
      
   
 
     
         
 


     
         
 
 

     
   
  
Template Sequence  ATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQE
Template Known Secondary structure 

ST

SS


TTTTTTS
SSTT

TT


TTTT
TT

Template Predicted Secondary structure 







































Template SS confidence 















































































   64.....70.........80.........90.........100.........110.........120.........130.........140...
 
   81........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 














































.....
Query SS confidence 










































































. . . . .
Query Sequence  AGQMLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDFVLGTRIITGAGKHLRFGGEVMKNVAGYDLSRLMVG. . . . .
Query Conservation   
  
   
 
    




 

    
  
  

   
 
  
 

   
 
   
    
   
 

  
  
.....
Alig confidence 










..





























































.....
Template Conservation   
         ..     

     
 
      
   
 
    

   
 
                     
     
Template Sequence  NNLPVMLSFSA. . PSAIAGPVGNTMDRGVGYTPYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDG
Template Known Secondary structure  TT
S



S..S
TT

TT
B
SSTT
BGGGG
TTS

GGGGSTT
S
TTT
S

SS


Template Predicted Secondary structure 










..








































Template SS confidence 















































































   144.....150.... .....160.........170.........180.........190.........200.........210.........220.
 
   156...160.........170....
Predicted Secondary structure  ..





Query SS confidence  . .


















Query Sequence  . . SYGCLGVLTEISMKVLPRP
Query Conservation  ..








   


 
 
Alig confidence  ..


















Template Conservation   

 
  



   


 
 
Template Sequence  MFTQANYGICTKMGFWLMPKP
Template Known Secondary structure  TTSSS



Template Predicted Secondary structure 








Template SS confidence 




















   222.......230.........240..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions