Job Description P52073 Confidence 16.88% Date Thu Jan 5 12:05:09 GMT 2012 Rank 91 Aligned Residues 65 % Identity 9% Template c3tgoD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:lipoprotein 34; PDBTitle: crystal structure of the e. coli bamcd complex Resolution 2.90 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	K	T	P	L	V	I	Q	G	S	N	S	K	A	F	L	G	R	P	V	T	G	Q	T	L	D	V	R	C	H	R	G	I	V	N	Y	D	P	T	E	L	V	I	T	A	R	V	G	T	P	L	V	T	I	E	A	A	L	E	S	A	G	Q	M	L
Query Conservation
Alig confidence																																					.												.
Template Conservation																																					.												.
Template Sequence		G	D	Y	A	I	P	V	T	N	G	S	G	A	V	G	K	A	L	D	I	R	P	P	A	Q	P	L	A	L	V	S	G	A	R	T	.	Q	F	T	G	D	T	A	S	L	L	V	.	E	N	T	L	W	P	Q	V	V	S	V	L	Q	A	K	N	Y	T	I
Template Known Secondary structure		S	T	T									S			G	G	G	S			S									S	T	T				.				T	T							.																T
Template Predicted Secondary structure																																					.												.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions