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Job DescriptionP52073
Confidence100.00%DateThu Jan 5 12:05:09 GMT 2012
Rank14Aligned Residues340
% Identity15%Templatec3popD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:gilr oxidase; PDBTitle: the crystal structure of gilr, an oxidoreductase that catalyzes the2 terminal step of gilvocarcin biosynthesis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40 .........50.........60.........70.........80...
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Query Sequence  DYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPV. . TGQTLDVRCHRGIVNYDPTELVITARVGTPLVTIEAALESAGQ
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Template Sequence  ATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPRRDLVLDLHNLHAI. GPAADGAGVRVGSGATVDQVQKALFRRWN
Template Known Secondary structure  SSTT

SS


SSSTTTSS

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TT


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SSSSSTT
BS
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   3940.........50.........60.........70.........80........ .90.........100.........110.......
 
   84.....90.........100.........110.........120.........130.........140....... ..150.... .....160
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Query Sequence  MLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDFVLGTRIITGAGKHLRFGGEVMKNVAGY. . DLSRLMV. GSYGCL
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Template Sequence  AALPLGAC. . SAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNF
Template Known Secondary structure  B




SB..TT
B



TT

GGGG
TTS
TT

TTTS
TTSS
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   118.120..... ....130.........140.........150.........160.........170.........180.........190.....
 
   161........170.........180...... ...190.........200.........210.........220.
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Query Sequence  GVLTEISMKVLPRPRASLSLRREISL. . . . . . . . . . . . . . . . . . . QEAMSEIAEWQLQPLPISGLCYFDNALWIRLEGGE
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Template Sequence  GVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHVSS
Template Known Secondary structure 



TTT
BTTTTB
B

SGGG

S

TT
GGGG
GGG
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   196...200.........210.........220.........230.........240.........250.........260.........270.....
 
   222.......230.........240.........250.........260.. ......
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Query Sequence  GSVKAARELLGGEEVAGQFWQQLREQQLPFFSLPGTLWRIS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LPSDAP
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Template Conservation                                                                                  
Template Sequence  GVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPRGGVMSWLTGTRYMSQADCGDVMGARSASKSAYHRAAPTDEQL
Template Known Secondary structure 
TTT
TT
SSSS


T
B
S
GGGTT
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   276...280.........290.........300.........310.........320.........330.........340.........350.....
 
   269270.........280.........290.. .......300........
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Query Sequence  MMDLPGEQLIDWGGALRWLKSTAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DNQIHRIARNAGGHAT
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Template Sequence  SVLHRHLHADHPGQASYVMFNSYGGEINRRGPSDAAVPQRDSVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVP
Template Known Secondary structure  TSSS

TT

GGGGGS
TTTSS



S
SS
GGGTGGGTTS
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   356...360.........370.........380.........390.........400.........410.........420.........430.....
 
   309310......... 320.........330.........340........
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Query Sequence  RFSAGDGGFAP. . . . . . . . . . . . . . . . . . . . . . LSAPLFRYHQQLKQQLDPCGVFNPGRMYA
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Template Sequence  VTGGRTDGCYINYPDADLLDPARNRSGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIG
Template Known Secondary structure 
TTSSB



TTS

GGGG
TTT

SS

GGG
TT

S

TT


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   436...440.........450.........460.........470.........480.........490.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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