Return to main results Retrieve Phyre Job Id

Job DescriptionP52073
Confidence100.00%DateThu Jan 5 12:05:09 GMT 2012
Rank16Aligned Residues341
% Identity17%Templatec2wdwB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative hexose oxidase; PDBTitle: the native crystal structure of the primary hexose oxidase (2 dbv29) in antibiotic a40926 biosynthesis
Resolution3.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40. ........50.........60.........70.........80...
Predicted Secondary structure 

















..


















Query SS confidence 



































. .









































Query Sequence  DYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVT. . GQTLDVRCHRGIVNYDPTELVITARVGTPLVTIEAALESAGQ
Query Conservation   
 


   
  
     
    
 

         ..
 


   

 
  

       
 


    
   
   
 
Alig confidence 



































..











.




























Template Conservation   
 


   
  
      
  

 


  
       

 


  

 
. 

     
 
 


    
   
     
Template Sequence  GSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEI. AYDPSMNAFLIEPGNTLSEVYEKLYLGWN
Template Known Secondary structure  SS


SS


SSTTSSSTT


TT


.TTTT
TT
BS
Template Predicted Secondary structure 

























.











Template SS confidence 















































































   65....70.........80.........90.........100.........110.... .....120.........130.........140...
 
   84.....90.........100.........110.........120.........130.........140........ .150.........160
Predicted Secondary structure 










































...




Query SS confidence 
































































. . .











Query Sequence  MLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDFVLGTRIITGAGKHLRFGGEVMKNVAGYD. . . LSRLMVGSYGCL
Query Conservation   
   
 
    




 

    
  
  

   
 
  
 

   
 
   
    
   
 
...
  
  





Alig confidence 







..






















































...











Template Conservation          ..   



    

 
      
   
 
    

  

                  

  
   
  
 
Template Sequence  VTIPGGVC. . GGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNF
Template Known Secondary structure 





S
..SS
BTT


TT

GGGS
TTS
SSTT
TTTTTS
SSSS
Template Predicted Secondary structure 




..







































Template SS confidence 















































































   144.....150. ........160.........170.........180.........190.........200.........210.........220.
 
   161........170.........180..... ....190......... 200...
Predicted Secondary structure 





................

.....................



Query SS confidence 
























. . . . . . . . . . . . . . . .













. . . . . . . . . . . . . . . . . . . . .



Query Sequence  GVLTEISMKVLPRPRASLSLRREIS. . . . . . . . . . . . . . . . LQEAMSEIAEWQLQ. . . . . . . . . . . . . . . . . . . . . PLPI
Query Conservation 



   


 
 
           ................   
          .....................    
Alig confidence 
























................













.....................



Template Conservation 



  

 
 
                                                                    
Template Sequence  GVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEV
Template Known Secondary structure 


SS


S
GGGSS



S
GGG

S
STT
GGGG


Template Predicted Secondary structure 



























Template SS confidence 















































































   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   204.....210.........220.........230.. .......240.
Predicted Secondary structure 










..........................................
Query SS confidence 




























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .








Query Sequence  SGLCYFDNALWIRLEGGEGSVKAARELLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GEEVAGQFW
Query Conservation                 
    
        ..........................................        
Alig confidence 




























..........................................








Template Conservation                                                                                  
Template Sequence  PGMGESGFMMPIQVDATRPDARRLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPGRGGRGPASKTKAGYLRKRLTDRQIQ
Template Known Secondary structure  TT
SS
STTSTTSTT
TT



TTS





SS

SS


Template Predicted Secondary structure 





































Template SS confidence 















































































   302.......310.........320.........330.........340.........350.........360.........370.........380.
 
   242.......250.........260.........270.........280.........290.... .....300.........
Predicted Secondary structure 










............


Query SS confidence 




















































. . . . . . . . . . . .














Query Sequence  QQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQLIDWGGALRWLKSTAEDN. . . . . . . . . . . . QIHRIARNAGGHATR
Query Conservation                       
                               ............ 
       

   
Alig confidence 




















































............














Template Conservation                                                                                  
Template Sequence  AVYENMTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRDAILKVNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPV
Template Known Secondary structure 

TT
S

GGGGGS
TTTSS



S
SSSGGGTGGGTTS

Template Predicted Secondary structure 






































Template SS confidence 















































































   382.......390.........400.........410.........420.........430.........440.........450.........460.
 
   310......... 320.........330.........340.........
Predicted Secondary structure 






......................















Query SS confidence 









. . . . . . . . . . . . . . . . . . . . . .





























Query Sequence  FSAGDGGFAP. . . . . . . . . . . . . . . . . . . . . . LSAPLFRYHQQLKQQLDPCGVFNPGRMYAE
Query Conservation            ......................           

   

 







   
Alig confidence 









......................





























Template Conservation          
 
                     
 
     
  

   

  

 
   
  
Template Sequence  PNDVSDGAYINYPDSDLADPGLNTSGVPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP
Template Known Secondary structure  S
SSB



TTS

GGGTSTTT

SS

TGGG
TT

S

TT



Template Predicted Secondary structure 


































Template SS confidence 





























































   462.......470.........480.........490.........500.........510.........520...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions